| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5821 |
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| Symbol | xerD |
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| ID | 4042685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 4514 |
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| End bp | 6094 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637981240 |
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| Product | tyrosine-based site-specific recombinase XerD |
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| Protein accession | YP_587949 |
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| Protein GI | 94314740 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGACG ATCGAGATAC GCTGGCCGCC ACGAAACTGA CGCGAACGGA ATTTGCCGTC
GTGCGGGCGT ACGCCCAGGG CATGAAGCCC CTTGAGATCG CCAACCGGTA CCTGCAGGAC
CCCGACGACG ACGACGATCT GACCGAGCAC CAGGCCATAC AACGCATCCT GGCGCTGCGC
GATCGGTTGG TCCAGTTCGC TTTGCAGCAT GATCGCCCCG ATATAGCGGA GATGTTCGAG
GCGCTGCGCG GGCGCTCCGA CGCCGGCATG ACTCGCCGGG TAGATGCGCT GACTTCGATC
GAACAGTTGG GCCAGGGGCG CCCACTTCCG GGGCATCAGG TCTCCCTCTG GTTCGGCCCC
AGCCTGTCTC GACGACTGAT GGCAGCCGGC ATCCGGACGA TCGCCGACAT GACCGACCTG
GCCAATCGAA AAGGCAGCGG CTGGTGGCGT CATGTGCCGC GTATCGGGCG ACATTCTGCG
GAGATCATCG TCCGCTGGCT TGCCACGCAA TCCGCCCAGA CGGCGCTCAA GGTCAGTCCG
CATGTGCTCG CATCGGCACA AATAGTGGAT CGTAAAGCAC TTTATGCGAG GCCATTGGGA
CGAGGTATGG CATTCCCTGT TCCGCTTGAA CTGATGCGTG CACCGGAAAC ATTTGCTCCC
TGGGCGATGG CGCTGGGGGA AGAACTCAAA GACGTTCAAG GATGGGTGGC AGCACGGGCG
AGCTCTCCAA ACACCTGGAA GAGCTACCGT CGCGAGGCCG AGCGGTTTCT GCTCTGGGCT
GCCGGGCAAG GTAAGTCATT ACGTGCCATG GCTGCCGATG ACCTGGATGC GTATCGGGCG
TTCCTTGCCA ATCCGGAGCC TTCATCATTC TGGTGTGGCC CGGCCGGTCC GCGTGACAAG
GCGCACTGGC GGCCATTCGA AGGGCCATTG CGTACCAGTT CCTGCGAGGC GGCGATGCGG
GTGATCAGCG CGCTGTTGCG GGCATTGCGC AAGGGAGATC CGGCCAGGTT GGCGCGGAGC
GGCGTGGTCG ATGATGGGAC TGCCACCGTG CAGGCATCCT CCAAACCGGC GACGTTACCC
CGCGAGACGA TCGAATCATT CCTGGCCTGG CTGAGTGCCA GCCCGTCTTC ACCACGGCAG
CGTGCCGCGT TGGCGGCAGC GCTACTGCTC GCTCGTCACG GAATCCGGAT CGTCGAACTG
GCTTCGTTTC GCCTGGTTCA TTTTTCCTAC TCACCGTCTG CGGCGCCCCC TACGGGCCGG
CTGCTGCTCG AAGCAAAGAG TACGGCGAGG CGTGGCGAGA TCGTCCTGGA TCAGGATGCG
TGGTCCGCCC TGTCGGCCCA TTGGACGGAC CGACAACTGG CGTGGGATAC GTTGAGTGAG
GGATGGGATC CTGATGCCGC GTTGCTGGCG CCGATCGAGT ACCCGTCGAC AGCTCGGGGG
CGAGCCAAGC AATCGATAGC GACGGCAGGT TACTCGGCCA GTGGCTTGGA GCAATTGCTC
CGGGCAAGCT GGAGACGTTT TGCCGAGACG CACGACGTCG ACGTGGAAGC CTTCACGCCG
AGGCAGTTGC GGTTGGGGTG A
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| Protein sequence | MPDDRDTLAA TKLTRTEFAV VRAYAQGMKP LEIANRYLQD PDDDDDLTEH QAIQRILALR
DRLVQFALQH DRPDIAEMFE ALRGRSDAGM TRRVDALTSI EQLGQGRPLP GHQVSLWFGP
SLSRRLMAAG IRTIADMTDL ANRKGSGWWR HVPRIGRHSA EIIVRWLATQ SAQTALKVSP
HVLASAQIVD RKALYARPLG RGMAFPVPLE LMRAPETFAP WAMALGEELK DVQGWVAARA
SSPNTWKSYR REAERFLLWA AGQGKSLRAM AADDLDAYRA FLANPEPSSF WCGPAGPRDK
AHWRPFEGPL RTSSCEAAMR VISALLRALR KGDPARLARS GVVDDGTATV QASSKPATLP
RETIESFLAW LSASPSSPRQ RAALAAALLL ARHGIRIVEL ASFRLVHFSY SPSAAPPTGR
LLLEAKSTAR RGEIVLDQDA WSALSAHWTD RQLAWDTLSE GWDPDAALLA PIEYPSTARG
RAKQSIATAG YSASGLEQLL RASWRRFAET HDVDVEAFTP RQLRLG
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