Gene Rmet_5653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5653 
Symbol 
ID4042517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2412223 
End bp2413764 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content63% 
IMG OID637981072 
Producthypothetical protein 
Protein accessionYP_587781 
Protein GI94314572 
COG category[S] Function unknown 
COG ID[COG3333] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0296187 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTCGA ATGCATTACA TGATCTCTGG TTCGGCTTTG GGGTAGCGTT CCAGGGCAGC 
AACCTGATGT GGTCGTTCTT CGGCGTGCTG GTCGGTAACC TGATCGGCGT GCTGCCAGGC
ATGGGCGCGC TTTCAGCTAT CTCGATCCTG CTGCCGCTCA CCTACGTCAT GCACCCGGTG
CCCGCCATCC TGATGCTGGC CGGTATCTTC TACGGTTCGC AGTATGGTGG GGCGATCGGC
GCCATTCTGC TGAACCTGCC TTCGCACCCG CCGCACGCGG TGACCTGTAT CGACGGGTAC
CCGATGACCA AGGCAGGCAA AGGTGGCACG GCGCTTGGTA TCACGATGAT CTGCTCGTTC
TTCGCTGCGT CGGTGGGCAT TCTCGTGATG ATCTTCGCAT CGCCGCTGCT GACGACCATC
GCCTTCAAGT TCGGTCCCGC CGAGATCTTC TCGATCATGC TGCTGGGTCT GCTTGCCGGT
TCGACGATGT CGCGCGGATC GCCGCTGAAG GGCGTGGCCA TGACGCTGTT CGGCCTGCTC
TGCGGCGTGG TCGGCACCGA CGTGAACACT GGCACGTTCC GCTTCGCGCT GGGCATTCCG
GAACTGAGCG ATGGCCTGGA ACTCGTGGCC ATCGCAATGG GCCTGTTCGG GGTAGCTGAC
TTCATCCTGA ACGTGAACCG CATGACTGCG GTGACTTCCA ACGCCAAGCT TCGCATTCGC
GACATGCGTC CGAGCCTGGC CGAGCTGAAG GAGGCCTTCT GGCCGATGGT GCGCGGCACT
GGCGTAGGTA CGTTGTTTGG CGCGATGCCG GGCACGGGCC CGACGATCAC GACGTTCGTG
GCCTACGCGC TCGAACGCAA GATCTCCAAG ACGCCCGAGA AGTTCGGTAC CGGCATGATC
GCCGGCGTGG CGGCGCCGGA AGCCTCCTCG CACTCGAAGA CGCAGGTGGA CTTCATCCCG
ACGATGAGCC TGGGTATTCC GGGCGACGCC GTGATGGCGC TGATTCTTGG CGCGCTGATG
ATCCAGGGCA TCGCCCCGGG TCCGCAGCTC ATCAGCGACC ACCCGGACAT CTTCTGGGGC
CTGATCGCCA GCTTCTGGAT CGGCAACGTG ATTCTGATGA TCCTGAACGT GCCGATGATC
GGCGTGTGGG TCAAGCTGCT GCAGGTGCCT TACCGCTACC TGTTCCCGTC GGCGATGTTC
TTTATCGCAG TGGGCGTATT CAGCACGCAG AGCAGTCTGT TCCAGATCTG GGAAGTGCTG
GCCTTCGGCC TGATCGGCGC CTTGCTGATG TACCTGGAGT TCTCGGTCGC GCCGATTCTG
CTCGGCTTCG TGCTCGGACC GATGGTGGAA GAGAACTTCC GCCGCGCCCT GCTGCTGTCG
CGTGGCGACC TGGCCGTGTT CGTGGAGCGC CCGATCAGCT GCACGTTCGT GGTGATCTCG
GCGATGCTGC TGGCTGGCGT GACGTGGTCG GCCTGGCGCA ATCGCGGGCC GAAGAAGACG
GCCATCCAGG TGCTGGAATC GGAACTGGCG GTCAACGAGT AA
 
Protein sequence
MVSNALHDLW FGFGVAFQGS NLMWSFFGVL VGNLIGVLPG MGALSAISIL LPLTYVMHPV 
PAILMLAGIF YGSQYGGAIG AILLNLPSHP PHAVTCIDGY PMTKAGKGGT ALGITMICSF
FAASVGILVM IFASPLLTTI AFKFGPAEIF SIMLLGLLAG STMSRGSPLK GVAMTLFGLL
CGVVGTDVNT GTFRFALGIP ELSDGLELVA IAMGLFGVAD FILNVNRMTA VTSNAKLRIR
DMRPSLAELK EAFWPMVRGT GVGTLFGAMP GTGPTITTFV AYALERKISK TPEKFGTGMI
AGVAAPEASS HSKTQVDFIP TMSLGIPGDA VMALILGALM IQGIAPGPQL ISDHPDIFWG
LIASFWIGNV ILMILNVPMI GVWVKLLQVP YRYLFPSAMF FIAVGVFSTQ SSLFQIWEVL
AFGLIGALLM YLEFSVAPIL LGFVLGPMVE ENFRRALLLS RGDLAVFVER PISCTFVVIS
AMLLAGVTWS AWRNRGPKKT AIQVLESELA VNE