Gene Rmet_5545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5545 
Symbol 
ID4042406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2291628 
End bp2292686 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content58% 
IMG OID637980963 
Productalcohol dehydrogenase 
Protein accessionYP_587673 
Protein GI94314464 
COG category[R] General function prediction only 
COG ID[COG1064] Zn-dependent alcohol dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGCT ACGACATCGT GGAGTGGGGC AAGCCTCTCC AGGAGGTTCT GCGAGACAGA 
CCAAAGCCGG TCGGTACTGA GGTTCTCGTA AAGGTGCAAG CCTGTGGGAT TTGCCATAGT
GACCTCCATA TTCGGGATGG CTTGCTGGAT CTTGGCAATG GGAAGCACAT TTCTTTCGAG
AGTGTTGGGG TAAAGCTGCC CTTTACGATG GGCCATGAGA TCGTTGGGGT CGTTGCAGAG
GCTGGCAGTG AGGCGTCAGT CAAGGCGGGG ACGCCTTGTG TTGTCTACCC GTGGCACGGT
TGCGGGACTT GTCTGAATTG CACCAACGGC CGTGAAGTTG ACTGTGAGAG TGGGCGGGCG
CTCGGTACCC GTAAGCCGGG GGGATACTCT GACTACGTCG TGGTACCGCA TGAGCAATAC
CTCCTGGATT ACGGAAATCT CGATCCGCTG CTTGCAGCTA CCTGTGCCTG TTCTGGGCTA
ACCTCGTTCA GTGCATTGAA GAAGCTTCCT CCCATGCTCG AGGCAGACAC GCTAGTACTA
ATCGGCGCTG GCGGGTTAGG GCTCGCGGCT CTTGGTTTGG CGCCGCAGCT CACTTCTGCG
CGGCTAGTGG TCGCAGACAT CGATGACGAA AAGCTCGCCC GCGCATCAGC GGCGGGGGCA
CATGAGGTGG TCAATCTTCG CTCCGAAAAC GCGGCTCGGG ATTTGCGAAA AGCAGCGCCA
AATGGGATTC GAGCGATTGT CGACTTTGTC GGCTCGGCGC AGACGACGGG CGTGGCGCTG
GAGAGTGTGG CCCGCGGAGG CACCGTCGTC GTCGTGGGCC TTTTTGGGGG CGCCATCTCT
TTGTCGACTG CACTTTTGCC CATGCGGAAC GTGACTCTGA GGGGCTCCTA TGTCGGCTCG
GTGGAGGAAA TGCGAGCGCT TTTGGATTTG CTACAAGAGA AAGGAAAGGG TTCGCCGGTC
AATCTCAAGT CGCTCCCAAT GTCTGCGGTC AATGAGGCTT TAGAAGAGCT TGCACAAGGT
CGGGTTGCTG GCCGTTTGCT GGCCATCCCT GGTCAGTGA
 
Protein sequence
MKSYDIVEWG KPLQEVLRDR PKPVGTEVLV KVQACGICHS DLHIRDGLLD LGNGKHISFE 
SVGVKLPFTM GHEIVGVVAE AGSEASVKAG TPCVVYPWHG CGTCLNCTNG REVDCESGRA
LGTRKPGGYS DYVVVPHEQY LLDYGNLDPL LAATCACSGL TSFSALKKLP PMLEADTLVL
IGAGGLGLAA LGLAPQLTSA RLVVADIDDE KLARASAAGA HEVVNLRSEN AARDLRKAAP
NGIRAIVDFV GSAQTTGVAL ESVARGGTVV VVGLFGGAIS LSTALLPMRN VTLRGSYVGS
VEEMRALLDL LQEKGKGSPV NLKSLPMSAV NEALEELAQG RVAGRLLAIP GQ