| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5507 |
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| Symbol | |
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| ID | 4042368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 2250813 |
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| End bp | 2251970 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637980925 |
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| Product | long-chain-acyl-CoA dehydrogenase |
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| Protein accession | YP_587635 |
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| Protein GI | 94314426 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAACG CACCATGGAT GAATCCCGAG CTGGAGACTC TGCGCGACAG CGCAAGGCGA
TTCTACGAGG CGGAACTTCT TCCGCATGAA GAGCGGTGGG CCCAACAGCA ATGTGTTGAC
CGGGACGTTT GGTACAAGGC AGCGGAGGCC GGCCTTCTTT GCGTCGGCAT TCCCGAAGAG
TACGGCGGCG GGGGAGGTAA CTTCCTGCAT GAGGCCGTCA TCTTCGCTGA GCAAGGTCGC
ATGCTATGCC CTGGGCTGGG CAATTCACTC CATAGTGGAA TCGTCGCACA TTACATCCAC
AACTTCGCTT CTGAGCAGCA AAAGCAGGAG TGGTTGCCGA AGATGGCCAA GGGAGAGTTA
GTCGGAGGGC TTGCCATTAC TGAGCCCGGC GCGGGGTCTG ACGTGCAGAG CATTCGTACG
GCGGCTCGGA AGGAGGGCGG TGATTACGTC ATCAACGGCG CGAAGACCTA CATCACTAAC
GGCAGCACAG CAAACCTCAT TTGCGTCGTA GTTAAGACGG ATCCTAACTT GGGAGCGAAG
GGCATTTCGA TCATCGTTGT CGAAACAGAC AAGGTAGAGG GTTTCCGGCG CGGACGAACC
CTATCGAAAG TGGGACTTCA TTCGCAGGAC ACAGCAGAGC TGTTTTTTGA CGATGTGAGA
GTTCCCCAAG CCAACCTTCT CGGCAACGTA GAAGGACAAG GATTCAAGCA ACTCATGAAA
GAGTTGAGTC GAGAACGCGT GATTACCGCC TTCATGTCGA TGGCATGTAT GGAGCGAGCC
ATCGAAGAGA CCTTGAAATT TGCTGCGGAC AGAAAAGTAT TCGGTCAGAC CTTGCTGTCC
ATGCAGAATA CGCGGTTCAA ACTAGCCGAG TGTGAAACGA AGTTGACGCT CGCGAAGGCG
ATGCTCAGCC ATTGCAGTGC CAGTCTCCTG GAAGGCCAAC TGAGCAGCGA GATAGCGGCC
ATGGCCAAGT GGTGGATCAC CGATGCTTGC GGCCAGGTCG TCGACGAGTG CGTGCAGCTC
CACGGTGGAG CAGGATTCAT GCTCGAGTAT CCGATTGCTC GGCTGTATCA AAACGTGAGA
ATCCACCGCA TCCTTGCAGG GACCAACGAG ATTATGAAGG AAGTGATAGC CCGAGAGCTT
GAAAAAAGAG CTGTCTAG
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| Protein sequence | MQNAPWMNPE LETLRDSARR FYEAELLPHE ERWAQQQCVD RDVWYKAAEA GLLCVGIPEE
YGGGGGNFLH EAVIFAEQGR MLCPGLGNSL HSGIVAHYIH NFASEQQKQE WLPKMAKGEL
VGGLAITEPG AGSDVQSIRT AARKEGGDYV INGAKTYITN GSTANLICVV VKTDPNLGAK
GISIIVVETD KVEGFRRGRT LSKVGLHSQD TAELFFDDVR VPQANLLGNV EGQGFKQLMK
ELSRERVITA FMSMACMERA IEETLKFAAD RKVFGQTLLS MQNTRFKLAE CETKLTLAKA
MLSHCSASLL EGQLSSEIAA MAKWWITDAC GQVVDECVQL HGGAGFMLEY PIARLYQNVR
IHRILAGTNE IMKEVIAREL EKRAV
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