Gene Rmet_5397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5397 
Symbol 
ID4042258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2125238 
End bp2126152 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content61% 
IMG OID637980815 
Producthypothetical protein 
Protein accessionYP_587525 
Protein GI94314316 
COG category[S] Function unknown 
COG ID[COG2326] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCGCA AAGAGATACT GGGCACCCTG GGGAGCTATA TCAATCCGTT CCGCATCACG 
CAGGGCGAGG AGTTCCGTCT GGCGGACTTC GATCCTGCCG ATACGCTGGG CTTCGAGATG
AAGAAGGGCG AGGCGGCGGA CCTGCTTCGG CACGGATCGG AATGGTTGGC GATAGAGCAG
GACGTGCTCT ACGCGCAGGA CTCCTGGTCG GTGCTGCTGG TGTTCCAGGC CATGGACGCG
GCCGGCAAGG ACGGGACGAT CAAGCACGTC ATGTCTGGCG TCAATCCGCA GGGGTGCGAT
GTCTTCTCGT TCAAGCAGCC GTCCCATGAA GAACTCTCGC ACGATTTTCT CTGGCGATAC
CTTGCGAAGG TGCCCCAGCG CGGACGCATT GGCATCTTTA ATCGGTCCTA CTACGAGGAC
GTGCTCGTGG TGCGGGTGCA CCGGCACCTG CTGGAGGCGC AGAAGATCCC GCCGGCGCTC
ATTACCGACA AGATCTGGGA CGAGCGGCTG GCCGATATTG CGCGCTTCGA GGACTACCTC
ACGCGGCAGG GCGTGATCAT TCTCAAGTTC TATCTGAACC TGTCGTACGA GGAACAGAAA
CGGCGATTCC TGAAGCGCCT TGACAAACCG AACAAGAGTT GGAAGTTCTC TCCCTCCGAC
GTGCGCGAGC GCCGGCACTG GGACGAGTAC ATGCAGGCCT ACGAGGCGGC GATCCGCGCG
ACTTCCACCG AAGCGGCCCC ATGGTATGTC GTGCCCGCCG ACAAGAAATG GTTCACGCGA
CTTGTCGTCG CGGCGGCCGT TGTCGAGGCC GTGGAGAAGT TGAATCTCCA GTACCCCGAG
ATCTCGTCTG ACCAGGCGAA GGCGCTGGCG AAGGCGCGTG AGGAACTCGA AGGGGAAAAG
AAGGCGGCGA AGTAG
 
Protein sequence
MPRKEILGTL GSYINPFRIT QGEEFRLADF DPADTLGFEM KKGEAADLLR HGSEWLAIEQ 
DVLYAQDSWS VLLVFQAMDA AGKDGTIKHV MSGVNPQGCD VFSFKQPSHE ELSHDFLWRY
LAKVPQRGRI GIFNRSYYED VLVVRVHRHL LEAQKIPPAL ITDKIWDERL ADIARFEDYL
TRQGVIILKF YLNLSYEEQK RRFLKRLDKP NKSWKFSPSD VRERRHWDEY MQAYEAAIRA
TSTEAAPWYV VPADKKWFTR LVVAAAVVEA VEKLNLQYPE ISSDQAKALA KAREELEGEK
KAAK