| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5301 |
|---|
| Symbol | fliP |
|---|
| ID | 4042162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 2003207 |
|---|
| End bp | 2004001 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637980719 |
|---|
| Product | flagellar biosynthesis protein FliP |
|---|
| Protein accession | YP_587429 |
|---|
| Protein GI | 94314220 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1338] Flagellar biosynthesis pathway, component FliP |
|---|
| TIGRFAM ID | [TIGR01103] flagellar biosynthetic protein FliP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.514548 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0599925 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTCGC TGCGTGCCGA CGTCGCACGG CATCCCGCGC GCCTGCCGCG CGTGGCCGCC
ACCCTGCTGG CATTGCTGCC GCTCGTGCTG TGGCTCGCGC CCGAATCGGC GCTGGCCCAG
TCGCTGCCCG GCGTGACCAG CCGGCCGGGA CCCGGCGGCG GCCAGACCTG GTCGCTGTCG
ATCCAGACGC TGGTCCTGTT GACATCGCTG TCGTTCCTGC CGGCGGCCAT GCTGATGATG
ACGGGCTTCA CTCGCATCAT CATCGTGCTG GGCCTGTTGC GCAACGCGCT GGGTACGGCA
TCGTCGCCGC CCAACCAGGT ACTCGTGGGC CTGTCGCTGT TCCTGACGTT CTTCGTCATG
TCGCCGGTGT TCGACAAGGT CTACACCGAC GCCTACCAGC CGCTCTCCGA AAACAAGATC
AGCCTCGAGA CCGCCGCCCA GCGCGCCGCC GTGCCGCTGC GCGCGTTCAT GCTGCGTCAG
ACTCGCGAGA AGGACCTGGC GATGTTCGCG CAGATGGCCA AAACGCCCGA ACTGCAGGGC
CCCGAGGACG TGCCGTTCAC GGTGCTGGTG CCGGCGTTCG TCACCAGCGA ACTGAAGACC
GCGTTTCAGA TCGGCTTTAC GATCTTCATC CCGTTCCTCA TCATCGACCT CGTCGTGGCC
AGCGTGCTGA TGGCGATGGG CATGATGATG GTGCCACCCG CCACCATTTC GCTGCCGTTC
AAGCTGATGC TGTTCGTGCT GGTCGATGGC TGGCAACTGC TGCTGGGCTC CCTGGCGCAG
AGCTTCATGA ACTGA
|
|---|
| Protein sequence | MNSLRADVAR HPARLPRVAA TLLALLPLVL WLAPESALAQ SLPGVTSRPG PGGGQTWSLS
IQTLVLLTSL SFLPAAMLMM TGFTRIIIVL GLLRNALGTA SSPPNQVLVG LSLFLTFFVM
SPVFDKVYTD AYQPLSENKI SLETAAQRAA VPLRAFMLRQ TREKDLAMFA QMAKTPELQG
PEDVPFTVLV PAFVTSELKT AFQIGFTIFI PFLIIDLVVA SVLMAMGMMM VPPATISLPF
KLMLFVLVDG WQLLLGSLAQ SFMN
|
|---|
| |