Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5289 |
Symbol | |
ID | 4042150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 1990659 |
End bp | 1991417 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637980707 |
Product | 3-oxoacyl-(acyl-carrier-protein) reductase |
Protein accession | YP_587417 |
Protein GI | 94314208 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.293158 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.122556 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTTG GTCTGAAGGA CAAACGAGCG ATAGTCACCG GCGGCAGCCG GGGTATCGGC AAGGCGATTG CGCTCCAGCT CGCGCAAGAA GGCGTCGACG TGGTGGTGGC AGCCCGTGGA CGCGCGGCGT TGGAAGCGAC GGCTGCGGAG CTGGCGACGC TGACAGGAAG ACGGATCGTG CCACTCGCCG TCGACACTTC CAGCAAGGCT TCCGTGGACA GCATGGTGAA CCAGGCCATC GCCGCATTGG GCGGCATCGA TATACTGGTC AACGCCGCTG CATTGCCCGG TGGAATCTCA TCGGCGTCCC GGCTCGATGA AATCGACGAT GCGCAAGCCA TTGAAGACAT CGACATCAAG GTGATTGGCT ATCTGCGCAC CGCGCGGGCG CTCGCGCCAC ACCTGATTGC CAATGGCTGG GGACGGATCG TGAACATTGG TGGCTTGGCG ATCTATCGCA CCGGCCGCCC CATTGCCACG CTGCGCAACG TCGGCGTGGC TGCGATCACC AAGAATCTGG CGGATGAACT CGGGCCGAAG GGCATCAATG TCACGGCGGT CCATCCCGGA GCGACACGGA CGGAGACAAC CGACGCGGCA TTCGAGGCCT GGGCCGCGGC AAGGACCTCG CTGGGCCGCA TTGTGGAAGC CCGCGAGGTT GCAGCCGTCG TGGCATTCCT TGCATCGCCA GTGAGTGTGG CGATCAATGG CGATGCCATT TCTGTCGCTG GCGGGAGCCC CGGCACCATC AGGTACTGA
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Protein sequence | MDLGLKDKRA IVTGGSRGIG KAIALQLAQE GVDVVVAARG RAALEATAAE LATLTGRRIV PLAVDTSSKA SVDSMVNQAI AALGGIDILV NAAALPGGIS SASRLDEIDD AQAIEDIDIK VIGYLRTARA LAPHLIANGW GRIVNIGGLA IYRTGRPIAT LRNVGVAAIT KNLADELGPK GINVTAVHPG ATRTETTDAA FEAWAAARTS LGRIVEAREV AAVVAFLASP VSVAINGDAI SVAGGSPGTI RY
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