| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5275 |
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| Symbol | |
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| ID | 4042136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1974500 |
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| End bp | 1975333 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637980693 |
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| Product | putative intradiol ring-cleavage dioxygenase |
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| Protein accession | YP_587403 |
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| Protein GI | 94314194 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.317456 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.187016 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAAG ACTCTCGGCC CCAGCCCTCG GGGCGCCGCC GTCATCTGCT GGCCATGGGG
CTTGGCGGCG CCGGCCTGAT GGCCGCATCG CGCATGGCCA CGGCGCAAAC GCCCGCCACG
CCTCTGCCCC TCACCGCGCA GACCACCGAG GGGCCGTTCT ACTTCGATGC CGGCAAGGTC
CGCCAGGACA TCACCGAAGG CCAGCCAGGC GTGCCGGTGG AGGTCCGCTT CACGGTGGTC
GACATGCATG GCCGGCCGCT CGCGGGCAGG CGCGTCGACC TCTGGCACTG CAATGCCTCG
GGGGTCTATT CCGGCTATGC GGGCCAGGTG GATGACCACG GCCAGCGCGT GTCCATGCGG
GACCGCACAT TCCTGCGCGG AAGCCAGCCG GTGGGCGCCG ACGGCGTGGC GGTGTTCCGC
ACCATCTACC CCGGTTGGTA CGCGGGGCGC GCCACGCATC TGCATATGAA GGTAATCGAC
GGCAGCCGTA CATTGCTGAC TACGCAGTGT TTCCTGCCCG ATGCGCTCAG CGAGTATCTC
TATACGCAAC TGCCGACATA CCGCCGCAAG GGCGTGCGCG AAGTCCTCAA CCGCAATGAC
GGTATCGCGC TGATGGCCGG CGATACCGTG CTGGGCGCCG TGCGCGAAGC CCGCGACCGG
TATGTGATCG CGCTGACCCT GGTGGTTGAT CCCACCGCCA CGGCGCCGCG CGAGCCAGGC
CATCCGCCGG GGCCACCACC CGGCGCACCC GGCGGCTTCG GCGAATCCAT GGTGCCTGCC
GAAGGCATGG CCCGCGTCGA GGCGATCGTT CCCGGCCAGC ATCTCCAGAA GTAG
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| Protein sequence | MPEDSRPQPS GRRRHLLAMG LGGAGLMAAS RMATAQTPAT PLPLTAQTTE GPFYFDAGKV
RQDITEGQPG VPVEVRFTVV DMHGRPLAGR RVDLWHCNAS GVYSGYAGQV DDHGQRVSMR
DRTFLRGSQP VGADGVAVFR TIYPGWYAGR ATHLHMKVID GSRTLLTTQC FLPDALSEYL
YTQLPTYRRK GVREVLNRND GIALMAGDTV LGAVREARDR YVIALTLVVD PTATAPREPG
HPPGPPPGAP GGFGESMVPA EGMARVEAIV PGQHLQK
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