Gene Rmet_5242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5242 
Symbol 
ID4042103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1940776 
End bp1941540 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content60% 
IMG OID637980660 
Producthypothetical protein 
Protein accessionYP_587370 
Protein GI94314161 
COG category[R] General function prediction only 
COG ID[COG4122] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.019453 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.202223 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGA CATCTCCCGA TTTTCTGGCT GTGCTGCGCA CGGAGCGAAG AGATCTGTTG 
AACCGGATGC GGCAGACCCG ATTCGAATCG CTCAGGGAAG GGTGCAGCCA CTCTCAGGTC
ATCCCCTTTG CCACCTTTTC ACCGTGGCTC GATGACGAGG CATTCTCCGC CATCTACGAG
ATCGTCAAGC CGTTCACCAT GGTGGACATC TACCGCTGCT ACGAGCTTTA CAGTCTTGCG
CGGCAATGCC GTCGCGTTGC CGGCGAGATC GTCGAAGTCG GTGTATGGCG GGGCGGTACC
GGTGCGTTGA TGGCTCATGC CTTGAACAAC CGGCCGGTGC ATCTGTTCGA TACCTTCAGC
GGCGTCGTCA AGCACGATGC CGAGTTCGAT ACGCTCTACT CGGGTGGAGA GCACGCCGAC
ACCGACGAAG ACATCGTGCG GAGCCTGTTT GCGAAGGCCA ACGTGGAATG CCGGATCCAC
CGCGGCATCT TCCCGGACGA CACGTTGCAA GGTCTGCCGG CATCGATCTG CCTCGCGCAT
ATCGACGTCG ACACTTACCG CTCCGTCAAG GAGTCGTTCG CGGAAATCTG GCCGCGGGTT
CAGCCGGGCG GCATGGTCGT ATTCGATGAC TTTGCCGTAT TCGGCTGCGA AGGCGCGAAC
CAGGCCGTCA ACGAAATCGT CGCGGCCCAC GATGACGGGC TGTTCATTCA CAACCTCAAC
GGCCACGCCC TGCTCGTCAA GCAACCCGCG ATGGCCCGCT CCTGA
 
Protein sequence
MEKTSPDFLA VLRTERRDLL NRMRQTRFES LREGCSHSQV IPFATFSPWL DDEAFSAIYE 
IVKPFTMVDI YRCYELYSLA RQCRRVAGEI VEVGVWRGGT GALMAHALNN RPVHLFDTFS
GVVKHDAEFD TLYSGGEHAD TDEDIVRSLF AKANVECRIH RGIFPDDTLQ GLPASICLAH
IDVDTYRSVK ESFAEIWPRV QPGGMVVFDD FAVFGCEGAN QAVNEIVAAH DDGLFIHNLN
GHALLVKQPA MARS