Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5233 |
Symbol | cydB |
ID | 4042094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 1930532 |
End bp | 1931569 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637980651 |
Product | cytochrome d ubiquinol oxidase subunit II |
Protein accession | YP_587361 |
Protein GI | 94314152 |
COG category | [C] Energy production and conversion |
COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.507916 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCGG CCACGATGCA CGATCTTTCC CAGCCGGCCG GCTGGATGCC GCTGGTGTTT CTGGCGTTGA TGGGCTTGTC GATGCTGATC TACGTGATCC TTGACGGCTA CGATCTTGGC GTGGGCGTGC TGCTGCGGCG CGCCGACGAC GTCGACAAGG ACACCATGAT CGCCTCGATC GGCCCGTTCT GGGACGCCAA CGAAACGTGG CTCGTGCTCG GCGTGGGCCT GCTGCTGACC GCGTTTCCGA TGGCGCACGG CGTCATCCTG ACGCAGCTGT ACCTGCCCGT GGCGCTGATG CTGGCCGGCC TGATCATCCG TGGCGTCGCC TTCGACTTCC GCGTCAAGGC ACGGGACCCG CACAAGCCCT GGTGGAACTT CGCGTTCTAT GCGGGCTCGC TGCTGGCCAG CTTCTCGCAG GGTCTGATGC TCGGCCTGTA CATCACCGGC TTCCGCTACG ACCTTCCCAA CCTGCTGTTC GCCGTGGCCG TTGGCCTGTG CCTGGTGGCC GGCTACTGCC TGCTGGGCGC AAGCTGGCTG ATCATGAAGA CCACGGGCAA CCTGCAGTTG CGCGCGATCT ACTGGGCGCG CCGCAGCCTG TGGCTCACCG CGATTGGCGT GGCCGCCATC TCGATCGTCA CGCCGATGGT CAGCGAGCGC ATTTTCGAGA AGTGGTTCTC CCTGCCGAAC ATCATCCTGC TGGCGCCGAT TCCGCTGCTG ACAATGGTGC TGTTCGTGGT CATCGAGCGA CTGCTGCGCC GGATGCGTGA CCTGCACGCG AACGGCAACG ACCGCTGGTG CTGGGTGCCG TTCGTGGGCA CCGCCGTGAT CTTCCTGCTG GCGTTCAACG GCCTGGCCTA CAGCCTGTTC CCGTACCTCG TGGTCGATCG CATCGACATC TGGCAGGCGG CCAGCGCGCC GGAATCGCTG ATGGTGATCC TGATCGGCGC GGTGATCGTG CTGCCCACGA TCCTGGGTTA CACGGCCTAC GCGTACCGTG TATTCTGGGG CAAGGCCACG GACCTGCGTT ACGACTGA
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Protein sequence | MNPATMHDLS QPAGWMPLVF LALMGLSMLI YVILDGYDLG VGVLLRRADD VDKDTMIASI GPFWDANETW LVLGVGLLLT AFPMAHGVIL TQLYLPVALM LAGLIIRGVA FDFRVKARDP HKPWWNFAFY AGSLLASFSQ GLMLGLYITG FRYDLPNLLF AVAVGLCLVA GYCLLGASWL IMKTTGNLQL RAIYWARRSL WLTAIGVAAI SIVTPMVSER IFEKWFSLPN IILLAPIPLL TMVLFVVIER LLRRMRDLHA NGNDRWCWVP FVGTAVIFLL AFNGLAYSLF PYLVVDRIDI WQAASAPESL MVILIGAVIV LPTILGYTAY AYRVFWGKAT DLRYD
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