Gene Rmet_5217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5217 
Symbol 
ID4042078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1911253 
End bp1912566 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content60% 
IMG OID637980635 
Producthypothetical protein 
Protein accessionYP_587345 
Protein GI94314136 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.13453 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGCA TCGAGACGCA CATTTTGGCT GTCGTGATCA TCGCCTGCTC GATCGCTGGC 
TGTGCCGTCC CACCTGCCGA TGTATCAGGA AGTGATTACC GCAGCCGCGC GGTGACTCGC
GTCCAGGGCG CATTGCGTGT ATCGGCAGCC GTTCTTTCCG CAGAGGAAAG CGCCGCCGTG
TATGGTGTCC CTCTGGCAAA GAAGAAGATT CAGCCGGTAT GGGTCGAGGT GCAGAACAAC
GACGATCGCA ATTACTTCCT GCTGTCGCCA GGCATGGACC CGAACTTCCT TCCCGCATCT
GAAGGGGCCG AAGCGTTCGC TGACGGCGCG TCGCAAGATG TCGCAGCCAG GCTCGAGGCG
CGCTTTGGCG CGCTCGCTTT TCACAATTCC ATCCCACCGG GGAAGACGGT CTCGGGCTTT
GTGCTCACCA ACCTGAACGC GGCTGTCAAG CTCGTTCAAC TGGACCTGGT CGCGAGTAGT
CGCGCAACGA CATTCTCGAT CCTGATACCA GTCCCAGGCT TCCGGGCCGA CTACAAGGCC
AGTGAAGTTT TTCTGCGCGA CGTCTATCCG CCCGACAAAA TCGTGGACTA CACGGACGAC
GACGCATTTC GTGCGGTGCT CGAAGCGCTG CCTTGCTGCT CGACCAACGA AGACGGTTCG
ATGAATGGTG ATCCGCTCAA TCTGGTGATC GTGGGCGGGC TGGACGACGC GTTTCCCGCG
CTCGTGCGCC GGGGCTGGCA ACCGGCCGAG CAGAAGTGGT CAGGCGCGAT CATGAAGATG
ATCACGTCGG CCCTGTCTGG CGAGCGCTAT GCCAACGCGC CCGTAAGCGA TCTGTATGTC
TTCGGGCGCC CGCAGGATCT CGCATTGCAG AAGGCGCGGG ATACCATCCA CCAGCGCAAC
CATCTGCGAC TCTGGCTGAC TCCAATGCGC TACCAGGGCA AGCCCGTCTG GATAGGCCAG
ATTAGCCGTG ACATCGGCGT CCGTCTTACG ACTCACTCGC CAACGCTTGT CACCCACAAG
ATCGACCCTG ACGTCGACGA AGCCCGCGCG GCGCTCACGG AGGACATGGG GTATTCGCAG
AATCTCGTCA AGGTCGGATT CGTCGGGGGC GTTGGCGGCG CACGGCCGGA CGCGCCGCGC
GAAAATCTGA CGACTGACCC CTACTACACG AATGGATACC GTGTCGTACT GGTGTTCGAC
CGCGCGCCGA CATTGCTCTC GGGAATCAGC CTGTTTCCGT GGAACATGGA AGACTTGCTC
AAGTATCCAA CTTCGACAAC AAACACTGAA ATCAAGCCCG GAGCGAAGCC ATGA
 
Protein sequence
MKCIETHILA VVIIACSIAG CAVPPADVSG SDYRSRAVTR VQGALRVSAA VLSAEESAAV 
YGVPLAKKKI QPVWVEVQNN DDRNYFLLSP GMDPNFLPAS EGAEAFADGA SQDVAARLEA
RFGALAFHNS IPPGKTVSGF VLTNLNAAVK LVQLDLVASS RATTFSILIP VPGFRADYKA
SEVFLRDVYP PDKIVDYTDD DAFRAVLEAL PCCSTNEDGS MNGDPLNLVI VGGLDDAFPA
LVRRGWQPAE QKWSGAIMKM ITSALSGERY ANAPVSDLYV FGRPQDLALQ KARDTIHQRN
HLRLWLTPMR YQGKPVWIGQ ISRDIGVRLT THSPTLVTHK IDPDVDEARA ALTEDMGYSQ
NLVKVGFVGG VGGARPDAPR ENLTTDPYYT NGYRVVLVFD RAPTLLSGIS LFPWNMEDLL
KYPTSTTNTE IKPGAKP