| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5216 |
|---|
| Symbol | |
|---|
| ID | 4042077 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 1909988 |
|---|
| End bp | 1911256 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637980634 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_587344 |
|---|
| Protein GI | 94314135 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.21306 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCGT CCGGGCGCCT GTGCGTCTTG TTGCGACGCG GTGCATCCAG CGCTCTGCTG
CTTGCGCTCG GTGCGTGCGC AACATGGCAG CCGCCCACCG ATGCCGGCGA CGGTCCGCTG
CGCGAGCGCG CCATCAGCGC GACCAGCCGC GACGTGCGTG TCAGTGCGAC CGTACTCGGC
AAGGAGGATA GCAAGCGCAT GCTAGGTGCC GACGTGACGA GGATGCGCGT GCAGCCGGTA
TGGGTGGAGA TCCATAACGG GACGGCCCAA CCGCTGTGGC TGCTGCGTTC GGGCACCGAC
CCGGACTACT TCTCGCCGCT CGAGGTGGCA TGGTCGTTGC ACACCCTGCT TGGCGGGACG
ATTAACCGGC GCATCGACGC TTACTTCAAC GGTCTTGGGT TCAGGAACCC CATCCAGCCC
GGGCAGACCC GCGCCGGCCT GCTGTTCACC AATCCCGACT ACATCACAAA GTTCGTCAAT
ATCGATTTCT TCGGCAGCAA TACCTTGATA CCGTTCACGC TGTATCTGCA GGTGCCAGAC
GACGAACGCT CTATGGCCGC ATCGCGGTCG CTGCTCATAT TCCGCTACCC CGAAGCCGAC
ATCCAGAACT ACACCGACCT GGCGTCGCTG CGGGCCGCAC TCGAGACGCT GCCAGCCTGC
GCCACGGATG CAAGCGGCAC CGGTCAGGGC GATCCATTGA ACGCGGTGAT TGTCGGCGAG
ATCGACGACA TCAGCGCTGC GGCAGTGCGT CGAAACTACC GGCGCGATCT GCGCCAGTCC
GACCTCCCTC AGCGGGTGTT AGACCGTCAA CCGGACGTAG TCACGCGCAA GCAGGCACAG
GCCGGCGCAC CTGCGATATG GATACGCGGA TGGCTCACGC CCATTCGATT TCAGGGGCAG
CCTGTCTTCG TCGCCCAAGT TGGACGCCCC GTTGGCGGGC GTTTCGCACG TACCGACGAT
CAATCCGTGC TCTTGCAAAG TGACGTCGAT GAGGCCAGAA ATCTGTTTGT CCAGGACATG
ATGTATTCGG GCGGCCTCGA GAAGCTCGGC TTCGTGTATG GCGTCGGTGC TGCTTCGCTG
CATTATCCGC GGACGACACT GGGCAATGCG ACTTACCACA CCGACGGGTT ACGTGCGGTT
CTGTTTTTCG TGACCCGTCC GCTCAGCGTT TCGGATGTGC AGTTTCTTGA CTGGGTGCCC
TATCTTGAGC AGCGAGAGCG TTTCCAAAGC GAGGAGAGCG ACGATGCAGC TCGACACGCT
GAGCACTGA
|
|---|
| Protein sequence | MSASGRLCVL LRRGASSALL LALGACATWQ PPTDAGDGPL RERAISATSR DVRVSATVLG
KEDSKRMLGA DVTRMRVQPV WVEIHNGTAQ PLWLLRSGTD PDYFSPLEVA WSLHTLLGGT
INRRIDAYFN GLGFRNPIQP GQTRAGLLFT NPDYITKFVN IDFFGSNTLI PFTLYLQVPD
DERSMAASRS LLIFRYPEAD IQNYTDLASL RAALETLPAC ATDASGTGQG DPLNAVIVGE
IDDISAAAVR RNYRRDLRQS DLPQRVLDRQ PDVVTRKQAQ AGAPAIWIRG WLTPIRFQGQ
PVFVAQVGRP VGGRFARTDD QSVLLQSDVD EARNLFVQDM MYSGGLEKLG FVYGVGAASL
HYPRTTLGNA TYHTDGLRAV LFFVTRPLSV SDVQFLDWVP YLEQRERFQS EESDDAARHA
EH
|
|---|
| |