| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5210 |
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| Symbol | amnE |
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| ID | 4042071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1904521 |
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| End bp | 1905285 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637980628 |
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| Product | 4-oxalocrotonate decarboxylase |
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| Protein accession | YP_587338 |
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| Protein GI | 94314129 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.39218 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.210604 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCATC ACGCCGCCAT TGCAGGCGCC CTGGACGCTG CCGCGCGCGA CGCCGCGGCG
ATCGGCCAGT TCAGCGCGGC CTCGCCGTTC ACGATTGACG AGGCCTACGG CATCCAGGCC
ATGTCGATCG AACACCGCTG CCAGCGCGGC GAACGCCGCG TCGGCATCAA GCTGGGTTTC
ACCAGCCGCG CCAAGATGGT CCAGATGGGC GTGGATAGCC TGATCTGGGG ATGGCTGACC
GACGCCATGA TCGAGGAAGA CGGCGGCCGC GTGGATCTGG AACGCTATAT CCATCCGCGC
GCCGAACCGG AGGTCTGCTT TCTGACCCGC CGCGACATCA CTGGCCCGCT GACCCTGCTG
GAGAGTGTCG ACTACCTGGA GGCCGTGGCG CCGGCGATCG AGATCATCGA CTCGCGCTAC
CGCGATTTCC GCTTCACGCT GGAAGATGTC GTGGCCGACA ACTGCTCGTC GGCGGGACTG
GTCGTCGGCC CGTGGTCGCG CAATGTTGAT GTACTGGCCA ATCTCGGCGT GGTGCTGCGC
ATCGACGGCC GCACCAGGCA AACGGGTTCG ACCGCCGCCA TTCTCGGACA TCCGCTGCGC
AGCCTCGTAC AGGCATCGCA CGTGCTGACG CGCGCCGGCG CAGTGCTGCC AGCCGGCAGC
CTGATCATGG CGGGAGCGGC CACGGCTGCG GAAGCGTTCG TGCGCGGCAA CCATGTTTCG
GCAACGATAG GCGCGCTTGG CCGCGCTTCT TTCCTGGCGG CATGA
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| Protein sequence | MSHHAAIAGA LDAAARDAAA IGQFSAASPF TIDEAYGIQA MSIEHRCQRG ERRVGIKLGF
TSRAKMVQMG VDSLIWGWLT DAMIEEDGGR VDLERYIHPR AEPEVCFLTR RDITGPLTLL
ESVDYLEAVA PAIEIIDSRY RDFRFTLEDV VADNCSSAGL VVGPWSRNVD VLANLGVVLR
IDGRTRQTGS TAAILGHPLR SLVQASHVLT RAGAVLPAGS LIMAGAATAA EAFVRGNHVS
ATIGALGRAS FLAA
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