Gene Rmet_5186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5186 
Symbol 
ID4042047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1879556 
End bp1880245 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content60% 
IMG OID637980604 
Productputative Voltage-gated potassium channel 
Protein accessionYP_587314 
Protein GI94314105 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.240486 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATCC GTACCACGCG CGACGCGCTC TCTCGCATTT TCTACCAGCG CTGTTTCTGG 
CTCTTTGTGG TGTTGCTCAC GCTCATCGGC GCGGTGTCGT TTGTCCCACC GACCGACAGT
GGCCGCCTCG TCCTGAACAT CGTCAATATG TTTCTGCTGC TGGCGACCGT GGCAGCCGTC
GGCCGCACAA CCCTGTCGTT CGTGATCGTG CTGTTACTTG CCGTTCCGGC CATGTGGTTT
CAGTACCTCG GCCTTTGGCA CGATGACGAC AGCAGCCTCG CCATATCCTG GCTGTTCAGC
GTTGCGCTCT ACTTCATCAC CGTCGCGTAT CTTCTCCGCT ATGTCTTCCA GCCCAGGATC
ATGACGCCGG ACAAGCTGTT TGGCGCCGCT GCCGCCTATC TGTTGATCGG CGTCCTCTGG
GCGTACGTCT ACGCGAGTAT CGGATTCTTC TATCCGCAGT CGTACATGGT CGTCGGGCAG
CCGGGGAGGC TCGTCTACGC CGACGCGCTT TACTTCAGCA TAACCGTCCT CACGAGCACA
GGCTTCGGCG ACATCACGCC ACTCACGCGC CCGGCACGCG GCATGTGCAT GGTGGAACAG
ATCACCGGCA GCTTGTTCGT CGCGATCTTG ATCGCCCGCC TCGCTGGCGT GTATCCGCCG
CGAGAGAGTT ACACGGACGA CAAATCCTAG
 
Protein sequence
MAIRTTRDAL SRIFYQRCFW LFVVLLTLIG AVSFVPPTDS GRLVLNIVNM FLLLATVAAV 
GRTTLSFVIV LLLAVPAMWF QYLGLWHDDD SSLAISWLFS VALYFITVAY LLRYVFQPRI
MTPDKLFGAA AAYLLIGVLW AYVYASIGFF YPQSYMVVGQ PGRLVYADAL YFSITVLTST
GFGDITPLTR PARGMCMVEQ ITGSLFVAIL IARLAGVYPP RESYTDDKS