| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5093 |
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| Symbol | |
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| ID | 4041954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1783091 |
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| End bp | 1784575 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637980511 |
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| Product | N-acyl-D-amino-acid deacylase |
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| Protein accession | YP_587221 |
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| Protein GI | 94314012 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3653] N-acyl-D-aspartate/D-glutamate deacylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00480971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.666286 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACTCC AGGAGACCCG TAGCATGGCT GAGCAGGCTT CGAACCATCA TGATCTGCTG
ATCCGGGGCG GCACCGTGAT CGACGGTAGC AAGGCACCGC GATTCACCGC CGACATTGCC
GTGCGCGATG GCCGCATCGC CGCTATCGGC GACCTTGCTG GTCACACTGC CGAGCGCACG
CTGGACGCCG CCGGCCGCAT CGTCGCCCCG GGCTTTATCG ACTCGCATAC CCACGACGAC
CAGGCGGTGC TGTCGCAGGC GGCAATGCCG TTCAAGATCT CCCAGGGCGT GACCACGGTG
GTGGCCGGCA ACTGCGGCAT CAGCGCTGCA CCGCTACGCG CCGACATGGA CCTGCCGATG
CCGCTGGGCC TGATCGATGC ACCGCCTGAA GGCCGCTTCA CAACCTTCGC CGCCTATCTG
GACGCCCTGC GCGCCACCCC CAGCTCGGTG AACGTGGCAG CGATGGTGGG GCACTCCACG
CTGCGCGCGG TCACCATGTC CGCGCTGGAT CGCCCCGCGA ACGACGACGA GATCGCAGCC
ATGCAGGCGC TGGTCGAGGA AGCGATGCAG GCGGGTGCCA TCGGGCTGTC GACCGGTACC
TTCTACCCGC CGGCGATCAA GGCCACCACC GAGGAGATCA TCGAAGTCTG CCGCCCGCTG
AGCGCGCGCA AGGCGCTCTA TGTCACGCAC ATGCGCAACG AGTCCGATCA GGTCATGGAA
GCGCTCGAGG AGACCTTCCA GATCGGCCGC GCGCTGGAAG TACCCGTGGT GGTGTCGCAC
CACAAGGTGC AGAACACGCC AAACTTCGGC CGCAGCCGCG TCACCCTGCC CTTTATCCAG
GAGACGATGC AGCACCAGTG CGTGTCGCTC GACTGCTATC CCTACACCGC CGGCTCCACC
ATGATCCGCA CCGAACCCGC CATGCTCGAG GGTCGCGTGC GCATCGCCTC CAGCGTGCCG
CACCCAGAAT GCACGGGCCG CGACCTGGAT GACATCGCCC GCGAATGGGG CGTCGCCAAG
CAGGAAGCCG CGCGGCGGCT GCAGCCCGGC ACGGCCATCT ACTTCCTGAT GGACGAAGCC
GACGTGCAAC GCATCCTGGC TTTCGACGAA ACGATGATCG GGTCGGATGG CATCCCGGTC
GGCGAGAATC CGCACCCGCG TCTGTGGGGC ACATTCCCGC GTGTGCTGGG GCATTACTGC
CGCGAGGTCG GCCTGTTCCC GCTGGAGACC GCCGTCTGGA AGATGACCGG CCTGACCGCG
CGCAACTTCG GCCTGCACGG GCGCGGCACG CTGGCGGTCG GCAACCATGC CGACATGGTG
ATCTTCGATG CCGGCACCAT CCGCGACGCC GCCGACTACG ACACGCCCAC GCGCCCGGCC
GAGGGCATCG ACACCGTGAT CGTCAACGGC GCCATCACCT GGCACGGCGG GCAGCATACC
GGCGCCAGGA ACGGCCAGGT CATCAAGCGT CGTCACGCCG CCTGA
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| Protein sequence | MPLQETRSMA EQASNHHDLL IRGGTVIDGS KAPRFTADIA VRDGRIAAIG DLAGHTAERT
LDAAGRIVAP GFIDSHTHDD QAVLSQAAMP FKISQGVTTV VAGNCGISAA PLRADMDLPM
PLGLIDAPPE GRFTTFAAYL DALRATPSSV NVAAMVGHST LRAVTMSALD RPANDDEIAA
MQALVEEAMQ AGAIGLSTGT FYPPAIKATT EEIIEVCRPL SARKALYVTH MRNESDQVME
ALEETFQIGR ALEVPVVVSH HKVQNTPNFG RSRVTLPFIQ ETMQHQCVSL DCYPYTAGST
MIRTEPAMLE GRVRIASSVP HPECTGRDLD DIAREWGVAK QEAARRLQPG TAIYFLMDEA
DVQRILAFDE TMIGSDGIPV GENPHPRLWG TFPRVLGHYC REVGLFPLET AVWKMTGLTA
RNFGLHGRGT LAVGNHADMV IFDAGTIRDA ADYDTPTRPA EGIDTVIVNG AITWHGGQHT
GARNGQVIKR RHAA
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