Gene Rmet_4999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4999 
Symbol 
ID4041861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1678988 
End bp1680508 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content61% 
IMG OID637980420 
Producthypothetical protein 
Protein accessionYP_587130 
Protein GI94313921 
COG category[S] Function unknown 
COG ID[COG5361] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0433305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAC TGCGCTGGAC GTCAATCGCA TTGGCTGCGC TTGCACTGGG TCTCTCCGGT 
GCCGCGATAG CACAGAGTTC CCGCTACGAC GCCCTTGCCA ATGCGGCATT CGAGAAGGAC
TATCCGACGC CAGAGACGTC ACGGATGCTG CAGGAAGAAC TTCTCTTCCA GCGTGCGACG
CAAGCCTATT TGTGGGCGCT GCCGGCCATC AACATCTGGG CGATGAAGGA AGGCTCGGAG
AAAGTCTTTG GCGGCGGCTA CAACGTTCTA CCGGTCTGGA AGGAACGGAT CAAGGCTTCC
ACACAGGTGA CGACGCCGAA CTCCGATGTG GTCTACGCGA TGGGCTATCT GGATCTCAAG
AAGGACGGCC CGATCGTCGT CGAAGCGCCG GCTGGTGTAC AGGGTATCCT CGACGACTTC
TTCCAGCGGC CGCTCGTGGG ACCGACGACC GAAGGCCGCA CCTGGACAGG CGACGTCGGC
CTGGCCGGCC CGGACAAGGG CAAGGGCGGG ACATACGTGC TGCTGCCGCC CGACTACAAG
GGCGAACCGC CGAAGGGATC GCTGCCAAAG GGGGCGTTCG TCTATCGGTC CCGGACGTAC
AACGTCTTCC TGTTCTGGCG CACGTTCTTT ACCGACCCGA AGGACCTGTC GAAGCCGAAC
GCGCAGATCG CTGCCACGCG CATCTATCCG CTGGGCCAGA AGGCGTCGGC GCGGCCGATG
CAGTTTCCCG ACGCCAACGG CAAGCCGGCC GATCTGCTGT TCCCACGTGA TGCGAGTTAC
TTCGACATGA TGTCGCGCTT CATCGACAGC GAGTACGTGG ACCCGTCGGA CCTCGACATG
CGAGGGTTCC TGCATACCAT TGGCATCGAG AAGGGCAAGC CGTTCTCGCC CAGCCCTGAA
ATGCGTAGCC TGCTTGAACG CGCAGCGCAG ACCGGCTTCA AGATCAGCAA GGTCGTGATC
GCCGACATGG TAGTCAAGGA GCCTGGCGGC AAGTACTACG CCGACAGGCA ATGGGTCAAT
GTCTTCGCCG GCGAGGACAC CTCGTTCCAG TCATCGCGCA CGTATACGAA CTTCGAGCAG
CGGTCGGGCT ATTTCACCAG CGCGTACTCG GCCAGCCCGG GTATGGTGAA GAACATTGTT
AACGCAGGCG CGAAGTACCC GGTCACCTCG CGCGACAAGG ACGGCAATTT TCTCGACGGT
GGCCAGTCGT ACACGCTACA TCTGCCACCC AACATTCCGG CGAAGAACTT CTGGTCCGCC
ACGGTCTACG ACGGCACCAC GGCGTCAGGA CTCGACAATG GCCAGTCGCA CCCGTCGCTC
AACCAAATGG ACAAGCCGGT GCAGAACCCC GACGGCTCGA CCAACCTCTA TTTCGGGCCC
ACCGCGCCGG CCGGCAAGGA GAAGAACTGG CTGCGGACGG TGCCTGGCAA GGGCTATTTC
GTCATCCTGC GGTTGTACTC ACCGGAAAAG GCGTTCTTCG ACCAGACTTG GAAGCCGGGT
GACATCGAGA AGGTCAAATG A
 
Protein sequence
MKELRWTSIA LAALALGLSG AAIAQSSRYD ALANAAFEKD YPTPETSRML QEELLFQRAT 
QAYLWALPAI NIWAMKEGSE KVFGGGYNVL PVWKERIKAS TQVTTPNSDV VYAMGYLDLK
KDGPIVVEAP AGVQGILDDF FQRPLVGPTT EGRTWTGDVG LAGPDKGKGG TYVLLPPDYK
GEPPKGSLPK GAFVYRSRTY NVFLFWRTFF TDPKDLSKPN AQIAATRIYP LGQKASARPM
QFPDANGKPA DLLFPRDASY FDMMSRFIDS EYVDPSDLDM RGFLHTIGIE KGKPFSPSPE
MRSLLERAAQ TGFKISKVVI ADMVVKEPGG KYYADRQWVN VFAGEDTSFQ SSRTYTNFEQ
RSGYFTSAYS ASPGMVKNIV NAGAKYPVTS RDKDGNFLDG GQSYTLHLPP NIPAKNFWSA
TVYDGTTASG LDNGQSHPSL NQMDKPVQNP DGSTNLYFGP TAPAGKEKNW LRTVPGKGYF
VILRLYSPEK AFFDQTWKPG DIEKVK