Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4974 |
Symbol | tniQ |
ID | 4041836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 1651534 |
End bp | 1652751 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637980395 |
Product | transposon related protein TniQ (Tn6048) |
Protein accession | YP_587105 |
Protein GI | 94313896 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.39202 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.593439 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGCCAG CGCCACGCTG GCCACTGCAT CCGGCCCCCA GAGAAGGCGA AGCCTTGTCT TCGTGGCTCA ACCGCGTGGC CCTTTGCTAT CACATGGAGG TGTCCGAGCT GCTGGAGCAC GATCTTGGTC ACGCTCAGGT TGATGACCTG GATACCGCGC CACCACTGGC GCTGTTGGCG ATGCTCTCCC AGCGGAGCGG CATCGAGCCG GACCGGCTGC GTTGCATGAG TTTCGCCGGC TGGGTGCCTT GGCTACTGGA CAGCCTTGAT GATCAGATTC CAGACGCATT GGAAACCTAT GCGTTCCAGC TCTCGGTGCT GCTGCCGAAA CTCCGCCGTA GGACGCGATC CATCACGAGC TGGCGTGCCT GGCTGCCCAG CCAGCCGATA CATCGCGCCT GTCCTCTCTG TCTGAACGAC CCGGCAAACC AAGCCGTACT GCTTGCATGG AAGCTGCCCC TGATGCTGAG CTGCCCGCTG CATGGCTGCT GGCTGGAATC CTATTGGGGC GTGCCTGGGC GGTTTCTCGG CTGGGAGAAC GCCGACACTG CGTCGCGCAC CGCCAGCGAC GCGATTGCAG TGATGGACCG GCGTACCTGG CAGGCACTGA CGACCGGCCA TGTGGAACTG CCGTGCCGAC GCATCCACGC TGGATTGTGG TTTCGACTGC TACGCACGCT GCTCGATGAG CTGAACACCC CGCTTTCGGC GTGCGGAACC TACGCGGGGT ATCTCCGCCA AGTCTGGCAA GGCTGCGGGC ATCCGCTGCG TGCTGGGCAA AGTCTGTGGC GACCGTATGA AACCCTGAAC CCGGCAATAC GGTTGCAGAT GCTGGAGGCG GCGGCAACGG CAATCAGCTT GATCGAGGTG AGGGATATCA GCCCGCCAGG CGAGCATGCA AAGCTGTTCT GGTCCGAGCT CCAAACCGGG TTCACCAGTG GTCTGCCGGC GAAACCGCCG AAGCCCGAAC CCGTCAATCA TTGGCAACGG GCGGTCCAAG CTATCAGTGA GGCGATCATT GAAGCCCGGC ACGACCCCGA GACGGCACGC TCGCTGTTCG CGTTGGCTTC CTATGGTCGG CGCGATCCCG CTTCCCTGGA ACAGTTGCGC GCCACCTTTG CAAAGGAAGG CATTCCCCCG GAATTTCTGT CACATTACGA GGCTGATGGA CCCTTTGCAT GTCTTAGACA GAATGACGGG TTAAGTGACA AATTTTGA
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Protein sequence | MKPAPRWPLH PAPREGEALS SWLNRVALCY HMEVSELLEH DLGHAQVDDL DTAPPLALLA MLSQRSGIEP DRLRCMSFAG WVPWLLDSLD DQIPDALETY AFQLSVLLPK LRRRTRSITS WRAWLPSQPI HRACPLCLND PANQAVLLAW KLPLMLSCPL HGCWLESYWG VPGRFLGWEN ADTASRTASD AIAVMDRRTW QALTTGHVEL PCRRIHAGLW FRLLRTLLDE LNTPLSACGT YAGYLRQVWQ GCGHPLRAGQ SLWRPYETLN PAIRLQMLEA AATAISLIEV RDISPPGEHA KLFWSELQTG FTSGLPAKPP KPEPVNHWQR AVQAISEAII EARHDPETAR SLFALASYGR RDPASLEQLR ATFAKEGIPP EFLSHYEADG PFACLRQNDG LSDKF
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