Gene Rmet_4974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4974 
SymboltniQ 
ID4041836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1651534 
End bp1652751 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content62% 
IMG OID637980395 
Producttransposon related protein TniQ (Tn6048) 
Protein accessionYP_587105 
Protein GI94313896 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.39202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.593439 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCCAG CGCCACGCTG GCCACTGCAT CCGGCCCCCA GAGAAGGCGA AGCCTTGTCT 
TCGTGGCTCA ACCGCGTGGC CCTTTGCTAT CACATGGAGG TGTCCGAGCT GCTGGAGCAC
GATCTTGGTC ACGCTCAGGT TGATGACCTG GATACCGCGC CACCACTGGC GCTGTTGGCG
ATGCTCTCCC AGCGGAGCGG CATCGAGCCG GACCGGCTGC GTTGCATGAG TTTCGCCGGC
TGGGTGCCTT GGCTACTGGA CAGCCTTGAT GATCAGATTC CAGACGCATT GGAAACCTAT
GCGTTCCAGC TCTCGGTGCT GCTGCCGAAA CTCCGCCGTA GGACGCGATC CATCACGAGC
TGGCGTGCCT GGCTGCCCAG CCAGCCGATA CATCGCGCCT GTCCTCTCTG TCTGAACGAC
CCGGCAAACC AAGCCGTACT GCTTGCATGG AAGCTGCCCC TGATGCTGAG CTGCCCGCTG
CATGGCTGCT GGCTGGAATC CTATTGGGGC GTGCCTGGGC GGTTTCTCGG CTGGGAGAAC
GCCGACACTG CGTCGCGCAC CGCCAGCGAC GCGATTGCAG TGATGGACCG GCGTACCTGG
CAGGCACTGA CGACCGGCCA TGTGGAACTG CCGTGCCGAC GCATCCACGC TGGATTGTGG
TTTCGACTGC TACGCACGCT GCTCGATGAG CTGAACACCC CGCTTTCGGC GTGCGGAACC
TACGCGGGGT ATCTCCGCCA AGTCTGGCAA GGCTGCGGGC ATCCGCTGCG TGCTGGGCAA
AGTCTGTGGC GACCGTATGA AACCCTGAAC CCGGCAATAC GGTTGCAGAT GCTGGAGGCG
GCGGCAACGG CAATCAGCTT GATCGAGGTG AGGGATATCA GCCCGCCAGG CGAGCATGCA
AAGCTGTTCT GGTCCGAGCT CCAAACCGGG TTCACCAGTG GTCTGCCGGC GAAACCGCCG
AAGCCCGAAC CCGTCAATCA TTGGCAACGG GCGGTCCAAG CTATCAGTGA GGCGATCATT
GAAGCCCGGC ACGACCCCGA GACGGCACGC TCGCTGTTCG CGTTGGCTTC CTATGGTCGG
CGCGATCCCG CTTCCCTGGA ACAGTTGCGC GCCACCTTTG CAAAGGAAGG CATTCCCCCG
GAATTTCTGT CACATTACGA GGCTGATGGA CCCTTTGCAT GTCTTAGACA GAATGACGGG
TTAAGTGACA AATTTTGA
 
Protein sequence
MKPAPRWPLH PAPREGEALS SWLNRVALCY HMEVSELLEH DLGHAQVDDL DTAPPLALLA 
MLSQRSGIEP DRLRCMSFAG WVPWLLDSLD DQIPDALETY AFQLSVLLPK LRRRTRSITS
WRAWLPSQPI HRACPLCLND PANQAVLLAW KLPLMLSCPL HGCWLESYWG VPGRFLGWEN
ADTASRTASD AIAVMDRRTW QALTTGHVEL PCRRIHAGLW FRLLRTLLDE LNTPLSACGT
YAGYLRQVWQ GCGHPLRAGQ SLWRPYETLN PAIRLQMLEA AATAISLIEV RDISPPGEHA
KLFWSELQTG FTSGLPAKPP KPEPVNHWQR AVQAISEAII EARHDPETAR SLFALASYGR
RDPASLEQLR ATFAKEGIPP EFLSHYEADG PFACLRQNDG LSDKF