| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4797 |
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| Symbol | rhsC |
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| ID | 4041659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1443203 |
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| End bp | 1448083 |
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| Gene Length | 4881 bp |
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| Protein Length | 1626 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637980218 |
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| Product | rhs-related transmembrane protein, YD repeat protein |
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| Protein accession | YP_586928 |
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| Protein GI | 94313719 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCCA CCGAGACGCC TCATAGTCCC GCCCGTCAGA TTCCCCAGGC CGTTCACGAC
AATGCCCAGG CCAGGCGCGT GGTCCTCAGT CCTGTCCCGG CACCTGTCAC CGCGCCCACG
CTAGTCCATG GCGCCATTGA CTCGGTGGCC GATCACAGCC ACGAACTCTT CATTCAGTGC
CTGTACATGG TTCCCGTCGT GGGCAATGCC ATGTCACTGT GGGATGTGGG CACCGACGTC
TACCGGCTGT GCAGCCAACC GAGTGCAGCC AGGAATCTGT TCGAGTGGGG CATTCTCGTC
ATCGACGCCA TCGGGGTGGT GCCAGCCGCC GGCAATGCGA GCCGCCCTGC GCGCGCCGTG
GTCAAGGAGG TGTTGCTCGC CTTCGCCAAG GGGCAAAGCA CCGCTGTCCT GGTGGATCTG
TTCTGGGCCA CCGCCGGCGG TGATGTGATC GAGTTCATGG CGCATCTGGA CGAACACCTC
AAGCGCTGGC AAGCGGACAT CATCAAGGGC GTGCAACAGG CGACCCGCAC GATTCGCACC
TTTGTGCAGA ACCCCATATC GGCCGCCGAG CAGATGGGCG TGATCCGCAA GAACAAGGGC
TTCTGGTCGT GGGTGCCGTC CACCGAGGAG GTGGCGTTAT ACGGCATTGA TGAACTGCTC
AAGCTGTCCG GCCAGCGCAC CGCCATTCTG GCGTGGCTGG ACGAGTTCGA ACGCAATACC
GAGCCAATGA TCCGCGCGGC GCTGGGCGAC GCGGCCAAGG CCGGCACGTT GCTGTTCATG
GCGGCGCAAA TCGTGGCGGA AATCAAGACG CGGCGCGCGC GTGGCAAGAC ACCCTCACAC
ACCGCCCAGG CTGCGCCAGG CGAATTGACC GAGCCGCACC GCAAGCCTGG GGAGCACCGC
GATACCACGC AGAAGCCCGC GAAGCCGGGC AAGACACCGG CCAGGGACGG CTGCGGCTGC
CCGGTAACGG CGAGTCCCAA GCCGGTCAAC TACGCCATGG GCGACGAGAA CCTGGCGCAA
ACCGATTTCG TGCTCGATGG CATCGTACCC ATCGTGTGGA CGCGGCGTTA CCGCTCCAGC
CTTTGCGCCT ACGACAACAG CCCCCTGGGC GCGCGCTGGA GCAGCCCCTA TCACCTGTCG
CTCGCGCCGC AGGACGATGG GTCGTTCCTC TTCTTCGACC CGGACAATCG TCCGGTGCCG
CTGCCGGCGG TTGAGCTGGG CGAGTCGGTC GAGGTGCCGG GCGAGCAGTT GACCCTGCAT
CGACCGGATG GGCGACAGGT GCGGCTCACC TATCCCGATG GCGCCGCGGA GGCCTACACG
CTGCACGGCG CGCGCTACCG CCTCACCACG CGCAGCCGGC GCGACGGGAT GGCGCTGATG
CTGTCTTATG ACAACCACGG CAATTTGATC GGCATGACCG GCGGGGCCGA GGCCACCATC
CGGCTGGACT ATGTCGAAGG CCGGGTGTCG GCCATCCACC GGGTGGACCT CAATGGCGAT
ATCCAGCTGA CCCTGGCGCG CTATCGCTAT GACCGGGCCG GCGACCTCGT ACGGCATGAG
AACGTGCTGG GTCATACGCG TAGCTTTGCC TACGTGCAGC ACCTGCTCAC CCAATACACC
GATTTCAACG GCAACGCGCA TCACCTCGAG TGGTCCTGGC CTGGGCGCGC GCATGGCCTG
CCGGCACCAG CCGATGCAAA ATGCGTGCGG ACGTGGATTG GCAAACACGC GGACGACCCA
CGCGAGGACA CGCGCTTCGA ATATCACCGC GAGCATTGGT ACACCAAGGT CACCGATGCG
GACGGCGGCA TCACCTATCA GCGCTATGAC TATCACAACC GGATCGTGAT GGTCGAGCAC
CCCGACGGCA GCAGCGAGCG CTTCGAGTGG GATGACCACA ACAACGTGGT GGGCGTGACC
AACGCCGAGG GTCAGGTGCA GCGCTTTGCC TATGACGAGC AGGGCCGCGC GACCGCCGTG
ACCGATGCAC TGGGCAACAC GACGCGTACC GAATACGACG CCGCAGGACT ACCCGTCAAG
GTCACGGCGC CGACTGGCGA AGTCACGCAG ACCGCGTACG ACGAACTGGG CCACCCGGTA
TCAGTGACCG ATCCGGCCGG ACGCATGACC CAATACGCCT GGAGCGGCGC GGGACTGCTG
CTCGCGCTCA CCGACCCAAA GGGGGGCGTG CAGACGTTCA CCTACGACCA CGGCGGACGG
CTTACCTGCG TACAGGACTG TTCGGGCCAC GAGACCCGGT ATTCGTACGA CGCCAACGGC
TTTCTGCTGC AACGGATCGA CGCCGAAGGC CACAGCACCG GCTACCGACA TGACGCCAGC
GGGCAGTTGC TGACGCGGAC GCACCCGGAC AAGAGCGAAG AGCGCTTTAC CTACGACCAC
GAAGGCAACC TCACCGCTTA CACCGACGCT GCAGGCCAGG TGACCGAGTA CAGCTATAAC
GCGCGCCACC AGCCGACCCT GCGGCGCGAC GCCGCAGGCC GTGAACTTTG GTACTTCTAC
GACAAGCAAT GGCGGCTGGC ACGCCTGCAG AACGAGGCTG GCGAGGCAAC ACGCTTCACC
TACGACGCGG TGGGCCAACT CGTGAAGCAA ACCGGTTTCG ATGACCGCAC GGTGCAGTAT
GCCTACGACG CAGCAGGCCG CCTGGTCGGT ACCGTCGAGG GCGAGATGCG CACGGACTAC
GAGCGCGATC CGCTGGGACG GTTGACCCGC CGTAGCGTAC GTGCCGAGGG GCTGCGCTCG
TCCGTGGACG AGCATTTCCA TTACGACGCG CAAGGGCGGC TGGTCACCGC CACGAGCGGC
GTGAGCACCG TGCACTTGCA CTACGACGAC GCCGGCAACC TGGTGGCCGA GCAGCAGCGT
TATGGGAGTG CGGGGAGCGG TTACGTCACG GTCAGCCGTC ACGAGTACGA CGCGCTGGGC
CATCGCACCC GAACCACCCT GCCGAACACG CGCACGGTGG ACTGGCTGCG CTACGGCTCT
GGCCATCTGC ACGGCGTGCA ACTCGATGGG CAGGCGCTGC TGGATGTTGA GCGCGACGGA
CTGCATCGGG AAGTCGCCCG CCAGCATCGG GGCTGGCGCC AGACGCGCGC CTACGATGTC
AACGGGCGGC TGGACAGGAT CGCCGTGCAC GCGGGAACGG GAGAGGGAAA GGGAAACATC
GACGTGCCGG GCGCGTGGAT CGCCCAGCGC CAGTTCCTGT ACAGCCAGAC CGGCCATCTC
GCGCGCATCC AGGACCATGC GCGCGGCGTG ACCGACTACA CCTACGATCC GGTCGGGCGT
CTGCTCAAGG CCGTGTCGCC GGACCTGACC GAGGTGTTTG CCTTCGATCC GGCGGGCAAT
CCGGTGGACC CGGACAAGGT AGCCCCACGC CCGGAGGTCG AGAGCAAGCC GGACAAGGTG
CTGCGCCACG CGCGGGAGGC CGCCGAGGAT GCCGCGTGGC TGCGCGAGCA TCCGGGCGAG
AAGTATGCGC CGCTGCGCTG GGATGAGCGG ACCTCGCGGG ACAGGGAGAA GCTGAAAGCC
TGGGAGGCGT CGCTGCCGCG CTGCGTGGGC AACGTGCTGC GCGAACTCTC GCGCACGCGC
TACGCGCACG ATGCGTATGG CAATCTCGTG CGGCGCACCG AGCCCAACGG CGTGACGTGG
CTGTACCAGT ACGATGCCGC CAACCGGCTG GAGCGGGCCG ACCGCTACGC CACGCCACCG
CCGGCTGAAG CACTGAAGCG CATCGAGCGC ACCCCGGATG GCGTGCTGCA CGCCTTCCCG
GCCAGGGTCG AACCCGACAT GCAGGTGCGC TTCCTGTATG ACGCGTTCGG GCGACGCACG
CTCAAGGCGG TCGAGCGGGC CGGCCGCCTT GAGCGCACCT TCTTTACGTG GGACGGCGAC
GTGCTGCTGA TGGAGGAACG CTTCCTCCAG GCAAAGCCGC AAGCGTTCAC CCCGCACGAA
TACCAGCCGA TCCCGGTCAT CCGGGAGCAT CCCGAAGATG CGCACTCGGT GCCGGTGGCG
CAGCGCCAGC ACACGCTGGC GCAATCCCAC CAGTGGCAAG GAGCTTCGCT ATATCTGCAC
GAGCCAGACA GCTTCGTGCC GCTGGCGCGG CTGGACGAGA CGCTAGTGGA ACCAGCCTTC
ATGGCGACGG GCACCGATGG ACGGTATGTG CAGGTGCCGG CCAAGAGCCG GCATGCGACG
CTCTTCTACC TGAACGACCA CCTGGGCACC CCGCAGGAAC TGGTCGACGA GTCGGGCAAG
GTCGTGTGGC TCGCCCGGTA CAAAGCCTGG GGCGGACTAA AGACCCCACG CAAGTCGACA
GACCCGACCG AGACCACCAA CGCCATCCGG TTCCCGGGGC AGTACCATGA TGTCGAGACG
GGCCTGCACT ACAACCGGCA CCGGTATTAC GATCCGGGTA GTGGGCGGTT CATTTCCAAA
GATCCGGTTG GGTTGGCGGG TGGGATTAAT GTTTATACGT ATGCGCCCAA TCCGGTGGGG
TGGGTTGATC CGCTTGGGCT GCGATGCGAT AGTCCTGCGG ATAAACTCGC ACGTAAACTG
CGAGCACTTC AAAAAGCACA GGGAAATGCC GCCTCCGCGC GAGGATTTCC TGATGGTCGA
ATCAGATATT ACGACACAGA AGTTCCGGCA TTAACGCAGG GACCTACACG GGGACGGTCA
CATGTAACCG AGTGGAATCC AGCAACAGGG CAGGTTCGAT CATGGGAGGA AACATATAAC
CACGCTGGTG AAGTTAACCG AGTTCATCCT AAGATGAATA ATGGCGAGGT GTTGGAATTG
CCTCACTATC CACCAACAAA ATCCGATATT GAGCAAGGCA AAGCGACGCC GTCCGGTAGG
GTTATAAGAG GCTGCACCTA A
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| Protein sequence | MAATETPHSP ARQIPQAVHD NAQARRVVLS PVPAPVTAPT LVHGAIDSVA DHSHELFIQC
LYMVPVVGNA MSLWDVGTDV YRLCSQPSAA RNLFEWGILV IDAIGVVPAA GNASRPARAV
VKEVLLAFAK GQSTAVLVDL FWATAGGDVI EFMAHLDEHL KRWQADIIKG VQQATRTIRT
FVQNPISAAE QMGVIRKNKG FWSWVPSTEE VALYGIDELL KLSGQRTAIL AWLDEFERNT
EPMIRAALGD AAKAGTLLFM AAQIVAEIKT RRARGKTPSH TAQAAPGELT EPHRKPGEHR
DTTQKPAKPG KTPARDGCGC PVTASPKPVN YAMGDENLAQ TDFVLDGIVP IVWTRRYRSS
LCAYDNSPLG ARWSSPYHLS LAPQDDGSFL FFDPDNRPVP LPAVELGESV EVPGEQLTLH
RPDGRQVRLT YPDGAAEAYT LHGARYRLTT RSRRDGMALM LSYDNHGNLI GMTGGAEATI
RLDYVEGRVS AIHRVDLNGD IQLTLARYRY DRAGDLVRHE NVLGHTRSFA YVQHLLTQYT
DFNGNAHHLE WSWPGRAHGL PAPADAKCVR TWIGKHADDP REDTRFEYHR EHWYTKVTDA
DGGITYQRYD YHNRIVMVEH PDGSSERFEW DDHNNVVGVT NAEGQVQRFA YDEQGRATAV
TDALGNTTRT EYDAAGLPVK VTAPTGEVTQ TAYDELGHPV SVTDPAGRMT QYAWSGAGLL
LALTDPKGGV QTFTYDHGGR LTCVQDCSGH ETRYSYDANG FLLQRIDAEG HSTGYRHDAS
GQLLTRTHPD KSEERFTYDH EGNLTAYTDA AGQVTEYSYN ARHQPTLRRD AAGRELWYFY
DKQWRLARLQ NEAGEATRFT YDAVGQLVKQ TGFDDRTVQY AYDAAGRLVG TVEGEMRTDY
ERDPLGRLTR RSVRAEGLRS SVDEHFHYDA QGRLVTATSG VSTVHLHYDD AGNLVAEQQR
YGSAGSGYVT VSRHEYDALG HRTRTTLPNT RTVDWLRYGS GHLHGVQLDG QALLDVERDG
LHREVARQHR GWRQTRAYDV NGRLDRIAVH AGTGEGKGNI DVPGAWIAQR QFLYSQTGHL
ARIQDHARGV TDYTYDPVGR LLKAVSPDLT EVFAFDPAGN PVDPDKVAPR PEVESKPDKV
LRHAREAAED AAWLREHPGE KYAPLRWDER TSRDREKLKA WEASLPRCVG NVLRELSRTR
YAHDAYGNLV RRTEPNGVTW LYQYDAANRL ERADRYATPP PAEALKRIER TPDGVLHAFP
ARVEPDMQVR FLYDAFGRRT LKAVERAGRL ERTFFTWDGD VLLMEERFLQ AKPQAFTPHE
YQPIPVIREH PEDAHSVPVA QRQHTLAQSH QWQGASLYLH EPDSFVPLAR LDETLVEPAF
MATGTDGRYV QVPAKSRHAT LFYLNDHLGT PQELVDESGK VVWLARYKAW GGLKTPRKST
DPTETTNAIR FPGQYHDVET GLHYNRHRYY DPGSGRFISK DPVGLAGGIN VYTYAPNPVG
WVDPLGLRCD SPADKLARKL RALQKAQGNA ASARGFPDGR IRYYDTEVPA LTQGPTRGRS
HVTEWNPATG QVRSWEETYN HAGEVNRVHP KMNNGEVLEL PHYPPTKSDI EQGKATPSGR
VIRGCT
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