| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4707 |
|---|
| Symbol | |
|---|
| ID | 4041568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 1350574 |
|---|
| End bp | 1351182 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637980128 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_586838 |
|---|
| Protein GI | 94313629 |
|---|
| COG category | [A] RNA processing and modification |
|---|
| COG ID | [COG5178] U5 snRNP spliceosome subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.813409 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCACG ATCTCGCCCG AAAGATCCTG ATCGGCACGA CTGGCTTCGT GTTGGCCGCC
GTCGTTTCCT GGTCGGTGAT GCCCGATCCG CGCACCAACC CGGCACTTGC AGCGATCAAT
ACCGGCCCTT CCTGGGGCAC GATGACGCGG CACGGCGCCT CCAGTGATGC CGCAGCGGCC
AGTCACGCGC ATCATTCCGC GGCGAAGCAC CCACCCGCCA GCGCCGCCGT GGCCCAGACG
CAGACCCATG CCGCACCACG CGAGCAGCTG GAGAAGCTGC GCAAGCCGAT GTCCGCCGAG
CCGGGGCACG ATCCCTTCAC GGCGTCATCG TGGTTGCCGC CGCCGCCCCC ACCGCCGCCT
CCGGAACCGG TCGTCGAGCC ACCGCCAACG CCGCCGCCCC TGCCGTTCAG CTTCCTTGGT
GCGCTGGACG GCAATACGCC CAAGCCGCAG ATTTTCCTGG GCAACGGCGA CCGCCTGTTG
ATTGTCTCTC GCGGCGACGT GATCGACGGG CAGTACCGTA TCGACGCGAT TGCGACCGAG
AGCATCACGT TTACCTACCT GCCGCTCAAT ATGAAGCAGG TCCTGCCCAC CCAGAGCGAG
GGGAAATAA
|
|---|
| Protein sequence | MTHDLARKIL IGTTGFVLAA VVSWSVMPDP RTNPALAAIN TGPSWGTMTR HGASSDAAAA
SHAHHSAAKH PPASAAVAQT QTHAAPREQL EKLRKPMSAE PGHDPFTASS WLPPPPPPPP
PEPVVEPPPT PPPLPFSFLG ALDGNTPKPQ IFLGNGDRLL IVSRGDVIDG QYRIDAIATE
SITFTYLPLN MKQVLPTQSE GK
|
|---|
| |