Gene Rmet_4687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4687 
Symbol 
ID4041548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1315933 
End bp1316574 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content68% 
IMG OID637980108 
Producthypothetical protein 
Protein accessionYP_586818 
Protein GI94313609 
COG category[S] Function unknown 
COG ID[COG4944] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.152399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.838028 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACAG ACGATCTCAT CTCCCTGCTG GCCACCGGCA TCCGCCCGGT GGACCCGCAC 
ATCATGCACC GGGCATTCGT CCGGGCGCTC TGCGCCGGTG CCGCCGGCGC GCTCCTGCTG
CTGACCATGA CGTATGGGGT GCGCCCAGAC ATCCGCGTGA TGCTGGTCAC GCCGATCTTC
TGGCTCAAGG TGGCGTTTCC GCTGTCGCTG GCAATCGGCG CATTCGTTGT GCTGAAACGG
CTGGTGGTGC CCGGCGCGCA GGTGGGTACC CGTTGGGCGG TGCCCGGCGT GCCGGTGCTG
GCGGTGTGGA TCGGCGCCCT GGCGGTGCTG GCCAATGTGC CGGCAACCGA GCGGCTGTCA
CTGATGCTCG GCATGACGTG GAGGACCTGC CCGTTCAATA TCGTGTTCCT GTCCTTGCCG
CTGTGCGTGG CGCTGGTCTG GGCGGTTCGG CAGATGGCCC CAACGAACCT CCGCGCCGCC
AGCGCCCTGG CCGGACTGCT CGCCGGTTCG GTGGCGACTA TCGTCTATTG CCTGCATTGC
CCCGAAATGG AGGTCCCGTT CTGGGCAATC TGGTATCTGG CCGGGATGCT GATTCCGGCG
GCGCTGGGCT GGCTGCTCGG CCCGCGCCTG CTGCGCTGGT GA
 
Protein sequence
MKTDDLISLL ATGIRPVDPH IMHRAFVRAL CAGAAGALLL LTMTYGVRPD IRVMLVTPIF 
WLKVAFPLSL AIGAFVVLKR LVVPGAQVGT RWAVPGVPVL AVWIGALAVL ANVPATERLS
LMLGMTWRTC PFNIVFLSLP LCVALVWAVR QMAPTNLRAA SALAGLLAGS VATIVYCLHC
PEMEVPFWAI WYLAGMLIPA ALGWLLGPRL LRW