| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4410 |
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| Symbol | |
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| ID | 4041269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1005072 |
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| End bp | 1006304 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637979832 |
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| Product | acyl-CoA dehydrogenase |
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| Protein accession | YP_586544 |
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| Protein GI | 94313335 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000319161 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.518491 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTCG ACATCCCCAG CGAGTGGGTG GAATTTGGCG ACGCGCTGAT CCGCTTTGTC
GATCGTGAAG TCGTCGCGCT CGAAAAGGAT CATCGCACCC TGCTGGCTAG CGAACGCACG
GTCTATACCG CCGACGGGCG CTATGCCCCG GAGGTGCTGG CGCTACGCCG CCAGGTACGC
ATGCGATCGG CCGAACTGGG CTTCTACACC GCGCTGTCCG CCGAAGCGCT CGGCGGTGGC
GGGCTGGGGC CGCAGGCCGC CGTCTACATC CAGGAGCGCC TGAACGCCCA CTGCGGCCCC
GAGCGCCATC TGGTGCAGAC CGTGGTGCTG CCCTCCCCAT TCACGAATGG GCTGTCGCCG
GTACTGAAGC ATCTTCATCC GTCGGTCTTC GAAAGCGTGC AGCCAGAACT GGCCAGCGGC
GACAAGACGA TGTGCTTCGG GCTTTCCGAA CCGGATGCCG GCTCGGACGT CTTTGGCATG
CGCACACGCG CTACGCGCGA TGGCGACCAC TGGGTGCTCA ACGGCACCAA GCAATGGATC
ACCAACGCGC CCTATGCGGA CTACGCGATG GTCTTCGCCG TCACCGACGA AGAGAAAGCC
CGCGCCCACA AGGGCGGCAT CACCGGCTTC TTCCTGCCCA CCCGCACACC GGGGTTCTCG
GTACCGAGCG TGATTCCGAC GATGGGACAC CTGGGCGCCG ACATCGGCAT CATCTCGCTG
GAAAACGTGC GCGTGCCGGA CACCCACCGC CTCGGGCCGG TCGACCGTGG CCTGTCCGTG
GCGCTCGACG GCGTCAACGC CGGTCGCCTG AGCATGGCCG CCAGTTGCCT CGGCCTGGCC
GAGTGGGCGC TGGAACAGGC CGTGGCCTAC GCCAAGGTCC GCAAGACCTT TGGGCAGCCT
ATCGGCGACC ACCAGGCCGT GCAGATCATG CTAGCCGAAT GCGCGATGGA CATCTACGCC
ACCAAATCGA TGGTCCGCCA CTGCGCCTGG CTGGTGGACA ACGATCTGCC CGCCACAAAG
GAGGTCTCCA TCATCAAGGC ATCGTCCACG GAGATGGCCG GGCGTGTCTT CGACCGGGCA
ATGCAGATTC ACGGCGGCAT GGGTCTGACC AACGAACTGC GACTCGAGGC CGGCTACCGC
TTCGTGCGCA CGATGCGCAT TCCCGATGGC ACCTCCGAGA TCCAGCGGCG CACCATCGCG
CGGCGTCTGC TCGACGGCGA CACGGCTTTC TGA
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| Protein sequence | MTFDIPSEWV EFGDALIRFV DREVVALEKD HRTLLASERT VYTADGRYAP EVLALRRQVR
MRSAELGFYT ALSAEALGGG GLGPQAAVYI QERLNAHCGP ERHLVQTVVL PSPFTNGLSP
VLKHLHPSVF ESVQPELASG DKTMCFGLSE PDAGSDVFGM RTRATRDGDH WVLNGTKQWI
TNAPYADYAM VFAVTDEEKA RAHKGGITGF FLPTRTPGFS VPSVIPTMGH LGADIGIISL
ENVRVPDTHR LGPVDRGLSV ALDGVNAGRL SMAASCLGLA EWALEQAVAY AKVRKTFGQP
IGDHQAVQIM LAECAMDIYA TKSMVRHCAW LVDNDLPATK EVSIIKASST EMAGRVFDRA
MQIHGGMGLT NELRLEAGYR FVRTMRIPDG TSEIQRRTIA RRLLDGDTAF
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