Gene Rmet_4340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4340 
Symbolmqo 
ID4041198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp934578 
End bp936293 
Gene Length1716 bp 
Protein Length571 aa 
Translation table11 
GC content60% 
IMG OID637979761 
Productmalate:quinone oxidoreductase 
Protein accessionYP_586474 
Protein GI94313265 
COG category[R] General function prediction only 
COG ID[COG0579] Predicted dehydrogenase 
TIGRFAM ID[TIGR01320] malate:quinone-oxidoreductase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAAA CGGACAACAA GACCGTGGCT GGCCGCGGCG GCAAGCCTTT CACCCGTCGT 
AAATTCCTTG CAGCCGCCGT CGGTGCCGCA GCCGCATGGG GCGGATACTC GTACTTTTTC
GGCAGCCAGT ACCGCGCCGC GAAGGCGGAT CGCAAGGTCG ATGTGCTGCT GATTGGCGGC
GGCATCATGA GTGCGACGCT CGGCGTCTAT CTGAAGGAGT TGGAGCCGAA CTGGACGTGT
GAGGTTTTCG AGCGTCTGGA TAAAGTCGCG GAAGAAAGCT CGAACGGCTG GAACAACGCC
GGTACCGGAC ACTCGGCGCT TTGCGAGCTG AACTACACGC CGATGGACGA TAAGGGGAAC
GTCCATATCG CCCAGGCCAT CAACATCAAC GAGAACTTCC AGATTTCCCG CCAGTTCTGG
GCGCATCAGG TGCGCAAGGG TGTTCTCGGC AATCCGCGTG AGTTCATCAA CTCGACGCCG
CACATGAATC TTGTCTTCGG GCAGGAGAAT CGGGAGTTCA TTCGTAAGCG CGTCGAGGCA
CTCAAGGCTT CGCCTCTGTT CGCGGGCATG GAAATGACGA CCGAACCGGC GAAGATCGCC
GAGTGGATTC CGGTCATGAT GGAAGGTCGC AAGCCCGATG AGGTGGTCAC CGCCACGCGT
TCGCCGCTGG GTACGGACGT GAATCTGGGC GAAATCACGC GTCAGTTCTA CAAGCACCTG
TCCGGCAATT CGGGAGTGAA AGTCACCACC GGCTATGAAG TGCGTTCGAT TACACGGAAT
GAGGACGGCA CCTGGCGTGT GTCCGCGTTC GACACGAAGG ATGGCTCCCA GATCCAGACG
GTGGATGCGC GAAACGTGTT CATTGGCGCA GGTGGCGCTG CATTGCCGCT GCTCCAACTG
TCCGGCATTC CCGAGGCGAA GCAATATGGT GGCTTCCCGG TTGGCGGCGA GTTCCTGGTC
ACCGACAAGC CTGAGATCGC GTCGCGCCAT CTGGCAAAGG TCTACGGTCT TGCGGATACC
GGTTCGCCTC CGATGTCGGT GCCCCACCTG GATACCCGCG TGCTCGATGG CAAGAAGGTG
ATCCTTTTCG GGCCGTTTGC CACGTGGTCC AGCAAGTTCC TCAAGAACGG CTCGTATTTC
GACCTGGCCA AGGCGACGAC GCCGTCGAAC GTCATTCCTC AGTTGCAAGT CGGCGCTCAC
GAATTTGCGC TCGTGAAGTA TCTTGCGCAG CAATTGGCGC TGTCCCGCGA AGAAAAGATG
GCGGCGCTGC GCCGCTACAT GCCCGAGGCG AAGGACGAGG ACTGGCGTCT GTGGGAGGCC
GGACAACGCG TGCAGATCAT CAAGAACGAT CCGGAGAAGG GCGGCGTACT GAAGCTTGGC
ACGGAGGTCG TGGTCTCTGG CGACCGTTCA GTATCTGCGC TGTTGGGCGC TTCGCCGGGC
GGCTCGACGT CGCCAGCGAT CATGTTGTCG TTGCTCGAGC GCGTTTTCCC CGAACAGATG
AAAACGGCGG CCTGGCAGCA AAAGATTCAT GAGATCGTGC CCAGCTACGG AAAAAAGCTC
AACGAAAACC CGCAGCTTCT GGCAAAGGAA TGGGCGACCA CGGCAGAAAC GCTGCAACTG
GCCATTGCTC CGCCAAGCCT GGACGGCGTT GTCCCGGCCA CCGTCCCAAT GATGAACCCG
GGTGTGGTGA AGAAGGTGCC CGATATGGCC CTGTAA
 
Protein sequence
MTQTDNKTVA GRGGKPFTRR KFLAAAVGAA AAWGGYSYFF GSQYRAAKAD RKVDVLLIGG 
GIMSATLGVY LKELEPNWTC EVFERLDKVA EESSNGWNNA GTGHSALCEL NYTPMDDKGN
VHIAQAININ ENFQISRQFW AHQVRKGVLG NPREFINSTP HMNLVFGQEN REFIRKRVEA
LKASPLFAGM EMTTEPAKIA EWIPVMMEGR KPDEVVTATR SPLGTDVNLG EITRQFYKHL
SGNSGVKVTT GYEVRSITRN EDGTWRVSAF DTKDGSQIQT VDARNVFIGA GGAALPLLQL
SGIPEAKQYG GFPVGGEFLV TDKPEIASRH LAKVYGLADT GSPPMSVPHL DTRVLDGKKV
ILFGPFATWS SKFLKNGSYF DLAKATTPSN VIPQLQVGAH EFALVKYLAQ QLALSREEKM
AALRRYMPEA KDEDWRLWEA GQRVQIIKND PEKGGVLKLG TEVVVSGDRS VSALLGASPG
GSTSPAIMLS LLERVFPEQM KTAAWQQKIH EIVPSYGKKL NENPQLLAKE WATTAETLQL
AIAPPSLDGV VPATVPMMNP GVVKKVPDMA L