| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4276 |
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| Symbol | |
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| ID | 4041134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 866978 |
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| End bp | 867871 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637979698 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_586411 |
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| Protein GI | 94313202 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0327554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCAGA ACCGCCACAT GAAACTCAAT CTCCAATCCC TGCTCCGCAT CCTGGCAACC
TGTCTGTTGG CTACGGCTGC CATTGCCCTG GGTTATAGCC TTTGGGCCCA CTACATGTAC
TCGCCCTGGA CCCGCGACGG ACGGGTACGT GCCGAAGTGA TCAACATTGC CGCGGATGTC
TCCGGGCTGG TGGCCCGTGT GGCCGTGCGC GACAACCAGG AGATACGCAA GGGCGACCTG
CTCTTCGTCA TCGATCAGGA ACGATTCCGC CAGGCACTTG CACAGGCCGA GGCACAGGCC
CAGGCGCGAA AGGCGGAACT CGACATGCGA CATCAGCAAG CCATGCGCCG GCGCGATCTG
GACAGTTCGG TGATCTCCGT CGAAAGCCGC GAAGATGTCA GCGCTCAGGA GAAGCAGGCC
CTGGCCAACT ACCAGGCCAG CCTGGCGGCG GTGGACACAG CCAGGCTGAA CCTGCAACGC
AGCGAAGTAC GCTCGCCGGC GGACGGCTAC GTGACCAACC TCAACCTGTA TGCCGGCGAC
TATGTAAGCG CAGGCACCGC GCGAATGGCG GTGATCGACA AGCATTCCTA TTGGGTCTAT
GGGTACTTTG AAGAAACCAA GCTGGCCAAC GTGCAGGTCG GCGCGAAAGT GGAGGTCCGT
CTGATGTCCG GTGGAGCCTC GTTGCGAGGA CACGTGGAGA GCCTAGCGCG AGGCATCGCC
GACCGGGACA ACCCCACCGG CGCAAACCTG CTCGCCGATG TGAATCCGGT GTTCACCTGG
ATCCGGCTGG CGCAGCGCGT GCCGGTGCGA ATACACCTCG ACGAAGAGCC TGCCGGACTG
CCGCTCGCGA TGGGAACAAC GTGCACGGTC ACGGTGCAGC CGGGCAACCC GTAG
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| Protein sequence | MRQNRHMKLN LQSLLRILAT CLLATAAIAL GYSLWAHYMY SPWTRDGRVR AEVINIAADV
SGLVARVAVR DNQEIRKGDL LFVIDQERFR QALAQAEAQA QARKAELDMR HQQAMRRRDL
DSSVISVESR EDVSAQEKQA LANYQASLAA VDTARLNLQR SEVRSPADGY VTNLNLYAGD
YVSAGTARMA VIDKHSYWVY GYFEETKLAN VQVGAKVEVR LMSGGASLRG HVESLARGIA
DRDNPTGANL LADVNPVFTW IRLAQRVPVR IHLDEEPAGL PLAMGTTCTV TVQPGNP
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