| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4253 |
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| Symbol | |
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| ID | 4041111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 840724 |
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| End bp | 841734 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637979675 |
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| Product | fimbrial protein |
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| Protein accession | YP_586388 |
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| Protein GI | 94313179 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000413623 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.180606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTGA CGTATAGAAC GATCAAAGCT GCACTCCGGT GGTTTGTGCT GCCGGTCTTG
CTGGCCCTCG GCGTGAACCA TGGAGCCCTT GCCGCGTGCA CAGTAACGAC CGCCAATCCG
GATTACATCT ACACGCTACC CAGCACCCTT ACTGTGGCTC GCAACGCACC GGTGGGTACG
GTGATCCTTA GCTACGCCCC CCCGGGACAG AACAACCCTA CGGCCTCTGG CACCTGCCCC
GTGACGGCAT ATGCGGTCGA TGCCATGGCC GGCTCATGGA CCACGACGTC TGTCGCGGAT
GTGTACGCCA CCAATGTCCC TGGCATCGGT ATCAAGGTCC TCGGGAAAGC CAGCAATCAC
CCAGTACCAC TACTCCCTAC GGTGTACCAA TGGTCCGGTA GCGCCACCGG ACCTTTCAGC
GGCTATTGGG ACAGCTTTGG GTATCAGCTC GTCGTTACCG GGCCAGTTTC CCCAGGGACG
CTCAGTTTTG CGAGTCCTGT GGCCAGTATG TGGCTGTCGA CTTCCACCAC CGCGCTCGTG
GATGCGGCGG TCGTCACCAA CCTGCAGATC AACGGCACCA CAAACATTGT GGCGCGTGCA
TGTACCACGC CCGATGTGAC TGTCAATCTC GGAAATCACC TGTCGTCGGA ATTCTCTGGC
GTGGGCTCGA AGACCTCGTC GACGAGTTTC AACATTGCGC TGAATGGCTG CCCGTCCGGG
CTGAACACGA TCCAATACCA GATCGATCCG GTAACGTCGA TCGTGTCGGG TACCGGCAAT
ACGGTGGTGG CCCTGAATAG CGGCTCGACG GCCAACCGAG TTGGCGTCCA GTTGCTCGAC
GGGAATGGCA ACCCGCTGGC CTTGTCCTCG CCCATCACGT TTAGCGGATA TAGCAGCAGC
ACCGGCGGCG ACTACACGAT TCCACTGAAG GCCAGGTACT ATCAGATCGA TACACCCGTT
GGGCCGGGTT CTGCCAATAC ATCGATGATA TTTACGATGA CCTATCAATG A
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| Protein sequence | MNVTYRTIKA ALRWFVLPVL LALGVNHGAL AACTVTTANP DYIYTLPSTL TVARNAPVGT
VILSYAPPGQ NNPTASGTCP VTAYAVDAMA GSWTTTSVAD VYATNVPGIG IKVLGKASNH
PVPLLPTVYQ WSGSATGPFS GYWDSFGYQL VVTGPVSPGT LSFASPVASM WLSTSTTALV
DAAVVTNLQI NGTTNIVARA CTTPDVTVNL GNHLSSEFSG VGSKTSSTSF NIALNGCPSG
LNTIQYQIDP VTSIVSGTGN TVVALNSGST ANRVGVQLLD GNGNPLALSS PITFSGYSSS
TGGDYTIPLK ARYYQIDTPV GPGSANTSMI FTMTYQ
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