| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4058 |
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| Symbol | ccmC |
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| ID | 4040916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 624657 |
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| End bp | 625436 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637979482 |
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| Product | cytochrome c heme exporter protein |
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| Protein accession | YP_586195 |
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| Protein GI | 94312986 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01191] heme exporter protein CcmC |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.804839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGCGCG ACATTTCCCT CGACGCCAAC GCCCATTCCC CACGCACCGC GCGGGCGCGC
TGGCTGGCCT TTGCCGCGCC AGTGCGCTTC TACCCGCTCG CGGGACGGCT TGCGCCCTGG
TGTTTCGCCG TTGCGGCGCT GTTCCTGGCC CTCGGCCTGT ACCTCGGATT CGTGGTGGCG
CCCACCGATG CCCAGCAGGG CGAGGTCTAC CGGATCATCT TCATCCACGT GCCGGCAGCG
TGGATGTCGA TGTTCATCTA CGTGGTCATG GCGGGCTGGT GTGCGCTGGC GCTGGTGCTG
CGCACGCGGC TGTCCTCGAT GATGGCGTCG GCGCTGGCGC CCACGGGCGC GATGTTCACG
GTCATCGCGC TGTGGACCGG GGCACTCTGG GGCAAACCCA CGTGGGGCAC GTACTGGGTC
TGGGACGCAC GGCTGACGTC GGAGCTGATC CTGCTGTTCC TCTACCTCGG CTACATGGCG
CTGGAGGCGG CCATCGACGA GCCCCGTCGC GCCGAGCGCG CCTGCGCCGT GCTGGCGTTG
GTCGGCGTGG CGAATGTGCC AGTGATCTAC TTTTCCGTGC AGTGGTGGAA CACGCTGCAC
CAGGGCGCAT CGGTCAGCCT GACCGCCGCG CCAACCATGG CGGCCACGAT GCTGGCCGGC
ATGTTGACGA TGACGGTGGC CTGCTGGCTA TACGCGATCG GCGTGGCGCT GGTGCGCCTG
CGCTGCATCC TGCGCGAGCG CGGCGAGATT GACACCGGCA CCCTGGAGAC CATGCCATGA
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| Protein sequence | MQRDISLDAN AHSPRTARAR WLAFAAPVRF YPLAGRLAPW CFAVAALFLA LGLYLGFVVA
PTDAQQGEVY RIIFIHVPAA WMSMFIYVVM AGWCALALVL RTRLSSMMAS ALAPTGAMFT
VIALWTGALW GKPTWGTYWV WDARLTSELI LLFLYLGYMA LEAAIDEPRR AERACAVLAL
VGVANVPVIY FSVQWWNTLH QGASVSLTAA PTMAATMLAG MLTMTVACWL YAIGVALVRL
RCILRERGEI DTGTLETMP
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