Gene Rmet_3959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3959 
Symbol 
ID4040817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp518809 
End bp519162 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content59% 
IMG OID637979383 
Producthypothetical protein 
Protein accessionYP_586096 
Protein GI94312887 
COG category[S] Function unknown 
COG ID[COG5605] Predicted small integral membrane protein 
TIGRFAM ID[TIGR02229] caa(3)-type oxidase, subunit IV 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.281179 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0264743 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCGA CACCCATCAC TCCGGCCCCC GAGGCGGCCC ACGGTGGTCA CGGCAAACAG 
GAACATCCTA TCGGCCTCTA TCTGAAGGTC TGGGGACTGC TGTTCGTGCT CTCCACGATG
TCCTATCTGG TGGACTACTT CGGGTTCACG GGATACCTGC GCTGGTTCCT GATTCTGCTG
CTGATGATCC TGAAGGCCGG CCTGATCGTC AGCGTATTCA TGCACATGGC CTGGGAGCGC
ATGGCGCTGA TCTGCGCGAT CCTGATCCCG CCGCTGTGCC TGCTCGTGCT GGTGTTTCTC
ATGGCGGCCG AAGCGGATTA CACTTTCCTG ACTCGCGGCG TGTTTTTTCA CTGA
 
Protein sequence
MASTPITPAP EAAHGGHGKQ EHPIGLYLKV WGLLFVLSTM SYLVDYFGFT GYLRWFLILL 
LMILKAGLIV SVFMHMAWER MALICAILIP PLCLLVLVFL MAAEADYTFL TRGVFFH