Gene Rmet_3914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3914 
Symbol 
ID4040767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp461908 
End bp462612 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content65% 
IMG OID637979333 
Productputative transcriptional regulator 
Protein accessionYP_586051 
Protein GI94312842 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.201642 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.600336 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATTC GAATACGGAA ATCTGCCATG CAAAGCCCCA TTACGAGTGC GCCATCCACC 
TCTTCCCCCT TCCCAAGGGT AGACACGACG TCGATCCTGC AACCGCCGCG ACAGCGCCGC
GCACGCGAGA CCGAGCAGGC CTTGCTTGCC GCCGGCCGCA AGCTGCTGGC CGAACGTGAC
TTCGCAGCGG TATCGGTCGC GCAGATCGCG GCGGCCTGCC AGGTTTCCGT CGGGGCGTTC
TACGGGCGCT TTCGCGACAA GATGGCGTTC TTCGACGCGC TGCGCACGCT GGTGATGGAA
GAGTCAGACG CCTCGGTGGC CCGCTACATG GCCGAACATC GCTGGGGCGA AGTACCGGCG
CGGCAGATCG TCGAGAAGAC CATGCGCTTC CTGGTCAATG GCTGCCACAA CAATCGCGGC
GTGATTCGCG CGTCGCTCAA GCATTCGTCC ACGCGCCCGG AGGAATGGCT GCCGCACCAG
AAGAACGGCG AGGAAATCGT CGAACGACTG GTGGCGCTGC TTACCCCCCG GCTGCCGGGC
CCGGCCGAAG CCAACGAAGT CCGCGTGCGT TTCGCCATGC AGATGGTGTT CGGCATGCTG
GTCAATGCCG TGCTCAACAA TCCGGGCCCG CTCCGGCTCG ACGACGAGCG CCTGTCCGGC
GAGATGACGC GCATGGTCGC CTGCTATCTC GGGCTGGAAA GCTGA
 
Protein sequence
MRIRIRKSAM QSPITSAPST SSPFPRVDTT SILQPPRQRR ARETEQALLA AGRKLLAERD 
FAAVSVAQIA AACQVSVGAF YGRFRDKMAF FDALRTLVME ESDASVARYM AEHRWGEVPA
RQIVEKTMRF LVNGCHNNRG VIRASLKHSS TRPEEWLPHQ KNGEEIVERL VALLTPRLPG
PAEANEVRVR FAMQMVFGML VNAVLNNPGP LRLDDERLSG EMTRMVACYL GLES