| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3908 |
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| Symbol | |
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| ID | 4040761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 455765 |
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| End bp | 458080 |
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| Gene Length | 2316 bp |
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| Protein Length | 771 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637979327 |
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| Product | putative small-conductance mechanosensitive channel transmembrane protein |
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| Protein accession | YP_586045 |
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| Protein GI | 94312836 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.385979 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCGTT CACGACTACG CGTTCCAGTT TTCACCTGGC TTGTCGGCAT CCTGATGGCG
ATGTTCCTGG CCGGCGCCGC GCAGAGCGCC GGACTGTCGC TCGCCGCGAT GACCCAGAAG
GCCAACGCCC AACCCGCTTC GGCACCCCCC GCCAGCGCGC CTCTGGCGCA ATCGCTCGAT
CAGGTCATCA ATACCTTGCA GAACGAGGGC GAACGACAGG CTTTGGTGAA GCAACTGCAG
GCGGTGCGTA CTGGCCTCGA CGCATCGGCG GCGGGCGCGG CAGGGGCGGC ATCGGCCGCT
GGCGCCAGCG CACCCTCCCC GGGCCTGATT GGCGCCGTTG CGCAGGCCAT CCAGGAAATG
GACAACGCGC CGCACAAAAA TAGCGGCGCA ATGCATTACT GGAAGTGGCG GATGGAGTTC
GCCCGCGAAG AACTGCACGA TGCCCTGACG ATCAAGAACA CCCGCAAAGC CATCGTCTCC
TGGACCGAAT TCGGCACCGT GTTTGCCGGG TGGGCCATTA CCGGCTGGCT GTTGCGGGAA
CTGGCTCGGC GATTGCGCCA GAATCGGTTG CGGCGGCCCA GAGACCACCA ACTCCCGAAA
ATACCTTCGT GGATCGATGT CAGCCTGTAC TTCGTGCGTG GCATTGGACC GTGGATCGTC
GCATTCGGCC TGACGGTACT GCTCGCCTAT CAAGTGTTCG GTCGCACGCC GGCCAGTGTG
GGCGCCGTTC TGGTGGCCTA CGCGATCCTG GCCGGCGCCG TGATGTCGGC GGTCTGCCAG
GTCATCTTCA CGCTGTTCCA GTCCGCGCAT CGCGCACACG CCGTGCGTGA CCTGATTACC
CATTCCCCGA TCCTGCTGTT CATCACCGGC TCACTGGCCG CGCTGGGAGA GGTCAACAGC
GATCCGCGCG TGATCGCCGC GCTTGGCCTC AACCTGACGG CGTTGATCAG CACGCTGTCC
AATATCCTCG CGGCGATCCT GATTGGCGTG TTTGCCGTGC GATTCCGCCG CGCCATCGGC
CAGTTGATCT CGTTCCGACC GTTTGCGATT CGGCAGGAAT ACCCCGCGAT GATGGATCTG
CTGCGCCTGG CGGGTGATGC GTGGTATCTG CCCGTGCTCG CCGTAGTCGC GGCATCGGTC
ATCGGCACGA TCATGGCCAC CGGCCATGCC GACGAGTTCC TGCGGCGCGC GGTCATCACG
GTGGCATTGT TCGTGACCGC CACGCTGTTG ACGCTCGTGG TGGGCCGATC GCCCAAGGCA
ACGGTGCGCG CCCCGCGCCT GCGCGATCGG CGGCGCTCCG CGTACGTGCA GCGCTTTGGC
CGCTTTGGCG CGGCGCTGAT CCGCGTGGTG ATCTGGATCA CATTCCTGGA ACTCAACGCG
CGTATCTGGC AGACCTCGCT GATACGAATT GCCCAATCGA CCGCCGCCGG CCGTCACATC
ACCGAGTCGC TGCTCGGCGT GGTCGGCGTG GTGCTGCTGG CATGGCTGGC CTGGCTGCTG
ATCGACACGG CCATCACCCA GACGCTTTCC CCCACGCACG GCCGCGCCGC GCAGCCCAGC
CTGCGTGCCA AGACCATCCT GCCCCTCGTG CGCAATGCGT CATTCGTGAG CGTGCTCGTG
GTAGCAATGA TCGCGGTGCT GGCCAACCTT GGCGTCAACG TCACGCCGCT GCTCGCCGGC
GCAGGTGTGG TCGGGCTGGC CATCGGCTTC GGTGCGCAAA CGCTGGTGCA GGATTTGATC
ACCGGTTTGT TCATCGTCGT CGAAGATACG ATCGCCATCG GCGATTCGAT CGAGTTGCCG
GACCATGTTG GCGTAGTCGA GGCCATGACG ATCCGGACCG TGCGACTGCG CGACGGCAAG
GGCGCCGTGC ACACGCTGCC ATACAGCCAG ATCAAGGCGG TCAAGAACCT GTCGCGCGGC
TATGCCTTCG CCGTCTTCAA CATCTCGATT GCCTATCAGA GCGACTTCGA GCGAGCATTG
GAGCTGGTGC GCGAAACCGG CGCCGAGGTG GCGCGCGATC ATCGCTACAG CCGCAACCTG
CTGTCCGGTC TGGACATCCT GGGGCTCGAC CGTTTCGATC CCACCGGTCA GGTCGTGCTG
GCCCAGTTCA AGACACGGCC ACTCACGCAG TACGAAATCA CGCGGGCCTT CAACATCCGG
CTCAAGCGCA ACTTCGACGC CAATGGCATT CGACTGGCCG TACCGTTCGT GACGGTGCAG
GTGGATGGCA GCGGCACTGA AGAAGAGATC GCGACAGCCG CCGCGGCTGG AGCAGGCGCC
GATCTCGTCA CCCGAAAAGC TGGCAAGCCG GCCTGA
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| Protein sequence | MQRSRLRVPV FTWLVGILMA MFLAGAAQSA GLSLAAMTQK ANAQPASAPP ASAPLAQSLD
QVINTLQNEG ERQALVKQLQ AVRTGLDASA AGAAGAASAA GASAPSPGLI GAVAQAIQEM
DNAPHKNSGA MHYWKWRMEF AREELHDALT IKNTRKAIVS WTEFGTVFAG WAITGWLLRE
LARRLRQNRL RRPRDHQLPK IPSWIDVSLY FVRGIGPWIV AFGLTVLLAY QVFGRTPASV
GAVLVAYAIL AGAVMSAVCQ VIFTLFQSAH RAHAVRDLIT HSPILLFITG SLAALGEVNS
DPRVIAALGL NLTALISTLS NILAAILIGV FAVRFRRAIG QLISFRPFAI RQEYPAMMDL
LRLAGDAWYL PVLAVVAASV IGTIMATGHA DEFLRRAVIT VALFVTATLL TLVVGRSPKA
TVRAPRLRDR RRSAYVQRFG RFGAALIRVV IWITFLELNA RIWQTSLIRI AQSTAAGRHI
TESLLGVVGV VLLAWLAWLL IDTAITQTLS PTHGRAAQPS LRAKTILPLV RNASFVSVLV
VAMIAVLANL GVNVTPLLAG AGVVGLAIGF GAQTLVQDLI TGLFIVVEDT IAIGDSIELP
DHVGVVEAMT IRTVRLRDGK GAVHTLPYSQ IKAVKNLSRG YAFAVFNISI AYQSDFERAL
ELVRETGAEV ARDHRYSRNL LSGLDILGLD RFDPTGQVVL AQFKTRPLTQ YEITRAFNIR
LKRNFDANGI RLAVPFVTVQ VDGSGTEEEI ATAAAAGAGA DLVTRKAGKP A
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