Gene Rmet_3901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3901 
Symbol 
ID4040754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp446493 
End bp447395 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content66% 
IMG OID637979320 
Producttranscriptional regulator 
Protein accessionYP_586038 
Protein GI94312829 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.356442 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTACG ACCTGACCGA CCTGCGGCTG TTTCTGAACG TGGGAGAAAC AGAGAACATC 
ACACGCGCGG CCGAGCGCAG CTTTCTCTCG CTGCCCGCGG CCAGCGCCCG CATCAAGCAG
CTTGAAGAGG CGTTCCAGAC CCAGTTGCTG ATCCGCCAGG TGAAAGGCGT GCGCCTCACT
CCGGCTGGCG ACGCCCTGCT GCGCCACGCG CGCGAGGTGT TCCGGGAGCT CGAATGCCTG
CATTCGGACC TGCGCCCCTA TGCCAAGGGC GTCAAGGGCC GCGTGCGCCT CCTGGCCAAC
ACCACGGCCA CCAACTCGTT CCTGGCCCAC GCGCTGTCGC GCTTCCTGTC GGAGAACCCG
GACGTCGACA TCGAGTTGGA GGAACACCTT TCGGCCGACA TCGTCTCGGC CATCGGCACG
GGGGCGGCGG ACCTCGGCAT CGTGGCGGGA GAAGTCGCCA CCGCCGACCT GGACACAATG
CAGCTTTGCA GCGACGAACT GATCGTGATC GCCCCTGTCA ACCATCCGCT GCCAGCCTTC
AAGACACTGC GGTTCGCCGA ACTGCTCGAT AGTTGCCGCT TTGTGGGGCT GAATCAGTCA
TCGGCGATCC AGTCCTTCCT GGACCGCATC GCCAGCGGCA TGGGCAAACG GATCAGCCTG
CGCATCCAGG TGGGCAGCTT CGACGCGGTG TGCCGCATGG TGGAAGCCGG CGCCGGCATC
GCCATCGTGC CGAACAGTTG CGCGCGGCGC TACGCCAGCC GCAAGGTACT GCGTTTCATC
CGGCTGGAAG ACGACTGGGC GCGACGCGAG TTGCAACTCG TGCGCCGGCC GGGACGGGAA
CTGCCCCAGT TCGCGGAAAC GCTGATTCAG TATCTGGTGG ATGCGGCCCG GGAGCCGGTG
TAG
 
Protein sequence
MHYDLTDLRL FLNVGETENI TRAAERSFLS LPAASARIKQ LEEAFQTQLL IRQVKGVRLT 
PAGDALLRHA REVFRELECL HSDLRPYAKG VKGRVRLLAN TTATNSFLAH ALSRFLSENP
DVDIELEEHL SADIVSAIGT GAADLGIVAG EVATADLDTM QLCSDELIVI APVNHPLPAF
KTLRFAELLD SCRFVGLNQS SAIQSFLDRI ASGMGKRISL RIQVGSFDAV CRMVEAGAGI
AIVPNSCARR YASRKVLRFI RLEDDWARRE LQLVRRPGRE LPQFAETLIQ YLVDAAREPV