Gene Rmet_3728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3728 
Symbol 
ID4040699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp270493 
End bp271638 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content66% 
IMG OID637979151 
Productputative acyl-CoA dehydrogenase 
Protein accessionYP_585869 
Protein GI94312660 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTTCA AGCTGAATGA TGCGCAGCAA ATGCTGCAGG ACAGCGCCCG CCGCTTCGTC 
GAGAAGGCAT ATGCATTCGA AGCCCGCACC GCGTTGATCC AGGCGGGCCA GACTGGCGGT
ACCCGTCACT GGCAGACCTT TGCCGAGAAC GGCTGGCTTG CCGCCGCGCT GCCGGAGACT
TGCGGCGGCC TGGGCGGTTC GGTGATCGAC ACCGCCCTGA TCGCGCAGGA ACTCGGGCGT
GGCCTGGTGC TGGAGCCATT TCTGGGTAGC GGCGTGCTGG CCACGCAGAC GCTGCTGGCC
GCAGCCACGC CGAGCCAGAG AGAGGCACTG CTGCCATCAC TGGCCGAAGG GACACGACGT
TACGCGCTTG CGTACAGCGA GGCCGATGCG CGTGGAATGC CGGAGATCCT TTCGACGTCT
GCCGAGGCTG GCACGGACGG CTACACGTTG CGTGGCACCA AGACGCTGGT GCTGGGCGGT
GTGGACGCCG ATGCCTTCAT CGTGTCGGCG CGCCTTGCCG ATAGTGGGGA GCCGTCTGCG
ATCACGCTCT TTCTCGTCGA CGCCGGCACG CCGGGTCTGA CGTGCCACGC GCTGCCACTA
CATGACGGCA CATGGGCGGC GGAGCTGGAG ATCGATGGGG CGCGCGTGCC GGCTTCGGCC
ATGCTCGGCC AGCCGGGCGA AGGTTTGCGG GCATTGCGCC ACGGGTTGGC GCATGCGACG
GCGGCGCTGT GCGCGGAGCT TGTCGGCGGC ATGGAGAAAG CCGTCGAGGT CACGGCGGAT
TACCTCAAGG TGCGCAAGCA GTTCGGCGTG CCCATCGGCA GCTTCCAGGC GCTGCAACAC
CGCATGTCCG ACATGGCCGC GGAGATGGAG CTGGCGCGTT CCATGCTGTT CTCGCTACTG
GCAGCCATCG ACCATGAGGA CGAAGCCACG CTGTTGCATC GGGTTTCCCA GGCCAAGGCG
TTTGTCGGCC GTGCTGCCCG GTATGTCTGC GGGCAGGCCA TTCAGTTGCA CGGTGGCATC
GGCATGACCG ACGAGTACTT GATCGGCCAC TACTACAAGC GCGCCATTGT TGCGGATTTG
ATCTTCGGCT CGGCGGATCG GCACGAGGCA ATCTGCGCCG AGGCCATTCA GGCGGCGATG
GCGTGA
 
Protein sequence
MHFKLNDAQQ MLQDSARRFV EKAYAFEART ALIQAGQTGG TRHWQTFAEN GWLAAALPET 
CGGLGGSVID TALIAQELGR GLVLEPFLGS GVLATQTLLA AATPSQREAL LPSLAEGTRR
YALAYSEADA RGMPEILSTS AEAGTDGYTL RGTKTLVLGG VDADAFIVSA RLADSGEPSA
ITLFLVDAGT PGLTCHALPL HDGTWAAELE IDGARVPASA MLGQPGEGLR ALRHGLAHAT
AALCAELVGG MEKAVEVTAD YLKVRKQFGV PIGSFQALQH RMSDMAAEME LARSMLFSLL
AAIDHEDEAT LLHRVSQAKA FVGRAARYVC GQAIQLHGGI GMTDEYLIGH YYKRAIVADL
IFGSADRHEA ICAEAIQAAM A