Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3728 |
Symbol | |
ID | 4040699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 270493 |
End bp | 271638 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637979151 |
Product | putative acyl-CoA dehydrogenase |
Protein accession | YP_585869 |
Protein GI | 94312660 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATTTCA AGCTGAATGA TGCGCAGCAA ATGCTGCAGG ACAGCGCCCG CCGCTTCGTC GAGAAGGCAT ATGCATTCGA AGCCCGCACC GCGTTGATCC AGGCGGGCCA GACTGGCGGT ACCCGTCACT GGCAGACCTT TGCCGAGAAC GGCTGGCTTG CCGCCGCGCT GCCGGAGACT TGCGGCGGCC TGGGCGGTTC GGTGATCGAC ACCGCCCTGA TCGCGCAGGA ACTCGGGCGT GGCCTGGTGC TGGAGCCATT TCTGGGTAGC GGCGTGCTGG CCACGCAGAC GCTGCTGGCC GCAGCCACGC CGAGCCAGAG AGAGGCACTG CTGCCATCAC TGGCCGAAGG GACACGACGT TACGCGCTTG CGTACAGCGA GGCCGATGCG CGTGGAATGC CGGAGATCCT TTCGACGTCT GCCGAGGCTG GCACGGACGG CTACACGTTG CGTGGCACCA AGACGCTGGT GCTGGGCGGT GTGGACGCCG ATGCCTTCAT CGTGTCGGCG CGCCTTGCCG ATAGTGGGGA GCCGTCTGCG ATCACGCTCT TTCTCGTCGA CGCCGGCACG CCGGGTCTGA CGTGCCACGC GCTGCCACTA CATGACGGCA CATGGGCGGC GGAGCTGGAG ATCGATGGGG CGCGCGTGCC GGCTTCGGCC ATGCTCGGCC AGCCGGGCGA AGGTTTGCGG GCATTGCGCC ACGGGTTGGC GCATGCGACG GCGGCGCTGT GCGCGGAGCT TGTCGGCGGC ATGGAGAAAG CCGTCGAGGT CACGGCGGAT TACCTCAAGG TGCGCAAGCA GTTCGGCGTG CCCATCGGCA GCTTCCAGGC GCTGCAACAC CGCATGTCCG ACATGGCCGC GGAGATGGAG CTGGCGCGTT CCATGCTGTT CTCGCTACTG GCAGCCATCG ACCATGAGGA CGAAGCCACG CTGTTGCATC GGGTTTCCCA GGCCAAGGCG TTTGTCGGCC GTGCTGCCCG GTATGTCTGC GGGCAGGCCA TTCAGTTGCA CGGTGGCATC GGCATGACCG ACGAGTACTT GATCGGCCAC TACTACAAGC GCGCCATTGT TGCGGATTTG ATCTTCGGCT CGGCGGATCG GCACGAGGCA ATCTGCGCCG AGGCCATTCA GGCGGCGATG GCGTGA
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Protein sequence | MHFKLNDAQQ MLQDSARRFV EKAYAFEART ALIQAGQTGG TRHWQTFAEN GWLAAALPET CGGLGGSVID TALIAQELGR GLVLEPFLGS GVLATQTLLA AATPSQREAL LPSLAEGTRR YALAYSEADA RGMPEILSTS AEAGTDGYTL RGTKTLVLGG VDADAFIVSA RLADSGEPSA ITLFLVDAGT PGLTCHALPL HDGTWAAELE IDGARVPASA MLGQPGEGLR ALRHGLAHAT AALCAELVGG MEKAVEVTAD YLKVRKQFGV PIGSFQALQH RMSDMAAEME LARSMLFSLL AAIDHEDEAT LLHRVSQAKA FVGRAARYVC GQAIQLHGGI GMTDEYLIGH YYKRAIVADL IFGSADRHEA ICAEAIQAAM A
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