Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3559 |
Symbol | |
ID | 4040408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 3859294 |
End bp | 3860010 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637978977 |
Product | response regulator receiver domain-containing protein |
Protein accession | YP_585700 |
Protein GI | 94312490 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0874597 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACCA TCCTCGTAGT CGATGACGAA ATGGGTATCC GGGAGCTGCT CTCGGAAATC CTGAGCGACG AAGGCCACGT GGTCGAAGTG GCGGAGAACG CCCAGCAGGC ACGCGAGTTT CGTGCAGGCG CGACGCCGGA CCTGGTGCTG CTCGATATCT GGATGCCAGA TACGGACGGC GTGACGCTGC TCAAGGAGTG GTCGGCACAG GGCTTCCTGA CCATGCCGGT CATCATGATG TCCGGCCATG CGACGATCGA CACGGCCGTC GAAGCCACCA AGATCGGCGC GCTCAACTTC CTTGAGAAGC CGATCGCGCT GCAGAAGCTG CTGTCCGCCG TCGAGGCAGG GCTGGCCCGT GGCGTCGAGC GCCCACGTGC CGCGCCTTCC GTGGTGGCCG CACCTGCCGC CGTCAGCACG GGCGAAGCCG CGGTCTCCGC GATAGCAACC GCCGAAGTAC CGGCCGAGGC CATCGCGAAC GGCACGGCCA CACGCGGTGT ACCCGAAGGT GAAATGCAGT TCTCGTTCGA CATGCCGCTG CGTGAAGCCC GCGACCTGTT CGAGCGTGCG TACTTCGAGT ACCACCTGGT GCGCGAACAC GGCAGCATGA CCCGTGTGGC GGAGAAGACC GGTCTGGAGC GTACCCACCT GTACCGCAAG CTCAAGCAGC TGGGCGTGGA ACTGGGCCGC AACAAGCCCG AGCCGACCGA ACAATAA
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Protein sequence | MATILVVDDE MGIRELLSEI LSDEGHVVEV AENAQQAREF RAGATPDLVL LDIWMPDTDG VTLLKEWSAQ GFLTMPVIMM SGHATIDTAV EATKIGALNF LEKPIALQKL LSAVEAGLAR GVERPRAAPS VVAAPAAVST GEAAVSAIAT AEVPAEAIAN GTATRGVPEG EMQFSFDMPL REARDLFERA YFEYHLVREH GSMTRVAEKT GLERTHLYRK LKQLGVELGR NKPEPTEQ
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