Gene Rmet_3559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3559 
Symbol 
ID4040408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3859294 
End bp3860010 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content65% 
IMG OID637978977 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_585700 
Protein GI94312490 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0874597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCA TCCTCGTAGT CGATGACGAA ATGGGTATCC GGGAGCTGCT CTCGGAAATC 
CTGAGCGACG AAGGCCACGT GGTCGAAGTG GCGGAGAACG CCCAGCAGGC ACGCGAGTTT
CGTGCAGGCG CGACGCCGGA CCTGGTGCTG CTCGATATCT GGATGCCAGA TACGGACGGC
GTGACGCTGC TCAAGGAGTG GTCGGCACAG GGCTTCCTGA CCATGCCGGT CATCATGATG
TCCGGCCATG CGACGATCGA CACGGCCGTC GAAGCCACCA AGATCGGCGC GCTCAACTTC
CTTGAGAAGC CGATCGCGCT GCAGAAGCTG CTGTCCGCCG TCGAGGCAGG GCTGGCCCGT
GGCGTCGAGC GCCCACGTGC CGCGCCTTCC GTGGTGGCCG CACCTGCCGC CGTCAGCACG
GGCGAAGCCG CGGTCTCCGC GATAGCAACC GCCGAAGTAC CGGCCGAGGC CATCGCGAAC
GGCACGGCCA CACGCGGTGT ACCCGAAGGT GAAATGCAGT TCTCGTTCGA CATGCCGCTG
CGTGAAGCCC GCGACCTGTT CGAGCGTGCG TACTTCGAGT ACCACCTGGT GCGCGAACAC
GGCAGCATGA CCCGTGTGGC GGAGAAGACC GGTCTGGAGC GTACCCACCT GTACCGCAAG
CTCAAGCAGC TGGGCGTGGA ACTGGGCCGC AACAAGCCCG AGCCGACCGA ACAATAA
 
Protein sequence
MATILVVDDE MGIRELLSEI LSDEGHVVEV AENAQQAREF RAGATPDLVL LDIWMPDTDG 
VTLLKEWSAQ GFLTMPVIMM SGHATIDTAV EATKIGALNF LEKPIALQKL LSAVEAGLAR
GVERPRAAPS VVAAPAAVST GEAAVSAIAT AEVPAEAIAN GTATRGVPEG EMQFSFDMPL
REARDLFERA YFEYHLVREH GSMTRVAEKT GLERTHLYRK LKQLGVELGR NKPEPTEQ