Gene Rmet_3551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3551 
Symbol 
ID4040399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3850373 
End bp3851887 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content65% 
IMG OID637978968 
Producthypothetical protein 
Protein accessionYP_585692 
Protein GI94312482 
COG category[S] Function unknown 
COG ID[COG3333] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACCC TGAACCAGTT GATGCACGGC TTTGCCGTGG CCATCACGCC GCTTAACCTG 
ATGTGGGCCC TGGTGGGCTG CTTCCTGGGC ACCGCGATCG GCGTGCTGCC GGGCATCGGC
CCGGCGCTGA CCGTGGCAAT GCTGCTGCCT CTGACCGCGA AGGTGGAACC GACCGCCGCG
CTGATCATGT TCGCCGGCAT CTACTACGGC GCGATGTACG GCGGCTCGAC GACCTCGATC
CTGATGAACA CGCCGGGCGA GTCGTCGACA ATGGTCACCG CGATGGAAGG CAACCTGATG
GCCAAGAACG GCCGTGCCGG CCCGGCGCTG GCCACGGCCG CGATCGGTTC CTTCGTAGCG
GGCACGATCG CCACGGTGCT GCTGTCGATG TTCGCGCCGG TGGCTGCCGA CGTGGCGCTG
CAGTTTGGCC CGGGCGAGTA CTTCATGATC ATGCTGCTGG CCTTCACGAC CGTTTCGGCC
GTGCTCGGTT CGTCGCTGCT GCGCGGCATG ACCAGCCTGT TCCTGGGTCT TGGTATCGGC
CTGATCGGCA TGGATTCGCT GTCCGGCCAG ACACGCTATT CGATGGACGT GCAGGAACTC
TACGACGGTA TCGACATTGT CGTGGTGGCC GTGGGCCTGT TCGCGGTGGG CGAGGCGCTG
TTCAACGCCT TCTTCCCGCA GCCCGAAGGC ACGTTCAACA AACTGAGCTC GGTCCACATG
AACAAGTCGG ACTGGAAGCG CTCGGTGCCG GCCTGGATTC GCGGCACGGT TATCGGCTTC
CCGTTCGGCC TGATTCCGGC CGGCGGCGCG GAGATTCCGA CGTTCCTGTC GTATGCCACT
GAGAAGAAGC TGTCCGACCA CAAGGACGAG TTCGGCCGCG TTGGCGCGAT CGAAGGCGTG
GCTGGCCCCG AGGCCGCCAA CAACGCCGCG GTGACCGCCA CGCTGGCCCC GCTGCTGACG
CTGGGCATCC CGACTTCGAA CACCACGGCA ATCTTGCTGG CGGCGTTCCA GAACTACAAC
CTGCAACCGG GTCCGATGCT GTTCCAGACC TCGGGCGATC TGGTGTGGGG TCTGCTCGCT
TCGCTGTATA TCGGCAACGT GATGCTGCTG GTGCTGAACC TGCCGGCAAT CGGCCTGTGG
GTGCGCATGC TGCGCGTGCC GACGCCGCTG CTGTACGGTG GCATTCTGAT CTTCGCAGGC
CTGGGCGCGT ACGGCATCCG CCAGTCGTGG TTCGATCTGC TGCTGCTGTT CGTGATCGGC
CTGCTCGGCA TGGCGATGCG CCGCTTCGAT TTCCCGACCG CGCCAGTCAT CGTCGGCCTG
ATTCTGGGGC CGATGGCCGA GAAGCAGCTT CGCAATGCGC TGTCGATCGG TCAGGGCGAC
TGGAGCCTGT TCATCAAGCA GCCGATCTCG GCAACCATCC TGGCCATGAC CGTGGCGGTG
GTGGTGCTCC CGCGTCTGCT GCGCTGGCAC GCCAGCCGTA CAACCGCGCG CGCGGAAGCG
GACAACGCGG CATAA
 
Protein sequence
MDTLNQLMHG FAVAITPLNL MWALVGCFLG TAIGVLPGIG PALTVAMLLP LTAKVEPTAA 
LIMFAGIYYG AMYGGSTTSI LMNTPGESST MVTAMEGNLM AKNGRAGPAL ATAAIGSFVA
GTIATVLLSM FAPVAADVAL QFGPGEYFMI MLLAFTTVSA VLGSSLLRGM TSLFLGLGIG
LIGMDSLSGQ TRYSMDVQEL YDGIDIVVVA VGLFAVGEAL FNAFFPQPEG TFNKLSSVHM
NKSDWKRSVP AWIRGTVIGF PFGLIPAGGA EIPTFLSYAT EKKLSDHKDE FGRVGAIEGV
AGPEAANNAA VTATLAPLLT LGIPTSNTTA ILLAAFQNYN LQPGPMLFQT SGDLVWGLLA
SLYIGNVMLL VLNLPAIGLW VRMLRVPTPL LYGGILIFAG LGAYGIRQSW FDLLLLFVIG
LLGMAMRRFD FPTAPVIVGL ILGPMAEKQL RNALSIGQGD WSLFIKQPIS ATILAMTVAV
VVLPRLLRWH ASRTTARAEA DNAA