Gene Rmet_3530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3530 
Symbol 
ID4040378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3823796 
End bp3824482 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content66% 
IMG OID637978947 
ProductYhhN-like protein 
Protein accessionYP_585671 
Protein GI94312461 
COG category[S] Function unknown 
COG ID[COG3714] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATGC CCCCACGCGT GCGCGAATGG TGGATTGCCG GCGTGCTGGC CGGCGTGACA 
TACGGCGTGA TGCTGATCCA GGTGTCCGCG TACTTGCCTC CCGGCACGCC GTTGACGGGC
CAGATCGCCT ATCAGCCGAT CTGGAAAACC GCGATGGCGG TCATGCTCGC GCGCGCGGCG
TGGTTCCATC GCCCGCTAGG AGAGCGGCGC TGGCTCGTGA CCGCGCTGCT CTTCTCCGCG
CTGGGAGATC TATTGCTGGC GCTGCCCGGT CTGAAGATCT CGTTCATTGG CGGGCTCGGG
GCGTTCCTGA TGGCGCACCT GGCCTATCTG CGCCTGTTCG TGCCGATGAT GGGAGACCTG
CGGCCGCATC GGCTGATCGG CTGTGGTCTG ATCATCGGCG CGGCGGGCGC ATTGCTTGGG
CGCTTCTGGC CGAATCTCGG CGATCTGATG TGGCCGGTCA CGGTCTACAT CTGCGTGCTG
GCGGCGATGG CCTGCACGAC GATGCTGGCA TCGCTGCCGA CGGCGCTGGC GGCAATCGGC
GCCCTGTTTT TCGTGGCGTC GGACGCGATG ATCGGTATCG CGAAATTCCT GTCGTTGTTC
GACACGTACC AACTCGGCAT CTGGTGGACC TACGCCATCG CACAGGTGCT GCTGGTGGCG
GGCGTGGTGG CCGAGCGGGA CGCGTGA
 
Protein sequence
MRMPPRVREW WIAGVLAGVT YGVMLIQVSA YLPPGTPLTG QIAYQPIWKT AMAVMLARAA 
WFHRPLGERR WLVTALLFSA LGDLLLALPG LKISFIGGLG AFLMAHLAYL RLFVPMMGDL
RPHRLIGCGL IIGAAGALLG RFWPNLGDLM WPVTVYICVL AAMACTTMLA SLPTALAAIG
ALFFVASDAM IGIAKFLSLF DTYQLGIWWT YAIAQVLLVA GVVAERDA