Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3519 |
Symbol | |
ID | 4040367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 3810485 |
End bp | 3811210 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637978936 |
Product | ABC transporter-related protein |
Protein accession | YP_585660 |
Protein GI | 94312450 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.348394 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAACG ACAACACTCC CGCGCTAGAG ATCAAGGACC TGCACGCCTG GTACGGCGAG TCGCACATCC TGCATGGCGT GGACCTGACC GTGAACCGCG GCGAAGTGGT CACGCTGCTG GGCCGTAACG GCGCCGGCCG CACCACGACC ATGCGCGCGA TCATGGGCCT GACCGGCGCA CGCAAGGGAT CGATCAAGGT CAACGGACAC GAGACGATCG GCCTGCCCAC GCACAAGATC GCGCACTTCG GCATCGGCTA CTGCCCGGAA GAGCGGGCGA TCTTCTCGAG CCTGTCGTGT GAGGAAAACC TGCTGCTGCC GCCGATGCTC AAGGGCGCCA ACGCAGGCAA GGGCATGAGC GAGGCCGAGA TCTACGAGAT GTTCCCGAAC CTCAAGGAGC GGCGCCAGAG CCAGGGCACG CGCCTCTCGG GCGGCGAGCA GCAGATGTTG GCAGTGGGCC GCATCTTGCG CACTGGCGCG AACCTGCTGC TGCTCGACGA GATTTCCGAA GGCCTCGCGC CGGTCATCGT GCAGGCGCTG GCCCGCATGA TCCTGATGCT CAAGAAGAAG GGCTACACGG TGGTGATGGT GGAGCAGAAC TTCCGCTTCG CCGCGCCGCT GGCTGACCGC TTCTACGTGA TGGAGCACGG CGCGATCGTC GAACGCTTCG CCGCGAACGA GCTGCAGGCC AAGATGCCCG TGCTCAACGA ACTGCTTGGG GTCTGA
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Protein sequence | MANDNTPALE IKDLHAWYGE SHILHGVDLT VNRGEVVTLL GRNGAGRTTT MRAIMGLTGA RKGSIKVNGH ETIGLPTHKI AHFGIGYCPE ERAIFSSLSC EENLLLPPML KGANAGKGMS EAEIYEMFPN LKERRQSQGT RLSGGEQQML AVGRILRTGA NLLLLDEISE GLAPVIVQAL ARMILMLKKK GYTVVMVEQN FRFAAPLADR FYVMEHGAIV ERFAANELQA KMPVLNELLG V
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