Gene Rmet_3519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3519 
Symbol 
ID4040367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3810485 
End bp3811210 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content65% 
IMG OID637978936 
ProductABC transporter-related protein 
Protein accessionYP_585660 
Protein GI94312450 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.348394 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAACG ACAACACTCC CGCGCTAGAG ATCAAGGACC TGCACGCCTG GTACGGCGAG 
TCGCACATCC TGCATGGCGT GGACCTGACC GTGAACCGCG GCGAAGTGGT CACGCTGCTG
GGCCGTAACG GCGCCGGCCG CACCACGACC ATGCGCGCGA TCATGGGCCT GACCGGCGCA
CGCAAGGGAT CGATCAAGGT CAACGGACAC GAGACGATCG GCCTGCCCAC GCACAAGATC
GCGCACTTCG GCATCGGCTA CTGCCCGGAA GAGCGGGCGA TCTTCTCGAG CCTGTCGTGT
GAGGAAAACC TGCTGCTGCC GCCGATGCTC AAGGGCGCCA ACGCAGGCAA GGGCATGAGC
GAGGCCGAGA TCTACGAGAT GTTCCCGAAC CTCAAGGAGC GGCGCCAGAG CCAGGGCACG
CGCCTCTCGG GCGGCGAGCA GCAGATGTTG GCAGTGGGCC GCATCTTGCG CACTGGCGCG
AACCTGCTGC TGCTCGACGA GATTTCCGAA GGCCTCGCGC CGGTCATCGT GCAGGCGCTG
GCCCGCATGA TCCTGATGCT CAAGAAGAAG GGCTACACGG TGGTGATGGT GGAGCAGAAC
TTCCGCTTCG CCGCGCCGCT GGCTGACCGC TTCTACGTGA TGGAGCACGG CGCGATCGTC
GAACGCTTCG CCGCGAACGA GCTGCAGGCC AAGATGCCCG TGCTCAACGA ACTGCTTGGG
GTCTGA
 
Protein sequence
MANDNTPALE IKDLHAWYGE SHILHGVDLT VNRGEVVTLL GRNGAGRTTT MRAIMGLTGA 
RKGSIKVNGH ETIGLPTHKI AHFGIGYCPE ERAIFSSLSC EENLLLPPML KGANAGKGMS
EAEIYEMFPN LKERRQSQGT RLSGGEQQML AVGRILRTGA NLLLLDEISE GLAPVIVQAL
ARMILMLKKK GYTVVMVEQN FRFAAPLADR FYVMEHGAIV ERFAANELQA KMPVLNELLG
V