| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3514 |
|---|
| Symbol | |
|---|
| ID | 4040362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 3805453 |
|---|
| End bp | 3806211 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637978931 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_585655 |
|---|
| Protein GI | 94312445 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.122556 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTTTG TCTTTCTGGC CGCGGCCGCC TTTCTGGCCG GAGTGATCGA TGCTGTCGCT
GGCGGCGGCG GGCTGGTGCA GGTACCGGCC CTGTTTTCCA CTTATCCCAA TATGTCGCCC
GCCACGCTGA TCGGCACCAC CAAGGTGGCG TCGCTGGCGG GCACCGCCAA CGCCGCGACA
CGCTATGCGC GCAAGGTGCG GATTTACTGG GGCGCCACGG CGCCGGCAAT GCTTGCCGCA
TTCGTGATGG CGATGGCCGG GGCCTGGACC CTGACCAAGA TTCCGGCTGA GCCGCTACGC
AAGGCACTGC CGCTGGTGTT GCTGGTGCTG CTGATCTACA CCGTAGCCAA GAAGAACCTG
GGTGCAGAGC ACGCGCCAAC CCTGACGGGG ACGCGTGAGC GCGTGGCCGC CTTGCTCGCG
GGCGCGGTGA TTGGCTTCTA TGACGGTGCC TTCGGTCCGG GTACCGGCAG CTTCCTGATG
ATCGTTTTCG TACGGGTGTT TGGTTACGAC TTCCTGCACG CGTCGGCGTC GGCCAAGGTC
GTCAACCTGG CCACCAATCT TGCGGCGCTG CTGCTGCTGG CATCCAAGGG ACATATCTGG
TGGCAGCTTG GCCTGATCAT GGCCGCGGCA AACGTTGCCG GCAGCCAGGT GGGCAGCAAG
CTTGCGCTGC GCCATGGCAG CGCCTTCGTG CGCAAGGTGT TCATCGCCGT GGTGAGCGCG
CTGATCCTGA AGACGGCCTA CGACGCGTTC CTGCGTTGA
|
|---|
| Protein sequence | MEFVFLAAAA FLAGVIDAVA GGGGLVQVPA LFSTYPNMSP ATLIGTTKVA SLAGTANAAT
RYARKVRIYW GATAPAMLAA FVMAMAGAWT LTKIPAEPLR KALPLVLLVL LIYTVAKKNL
GAEHAPTLTG TRERVAALLA GAVIGFYDGA FGPGTGSFLM IVFVRVFGYD FLHASASAKV
VNLATNLAAL LLLASKGHIW WQLGLIMAAA NVAGSQVGSK LALRHGSAFV RKVFIAVVSA
LILKTAYDAF LR
|
|---|
| |