Gene Rmet_3464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3464 
Symbol 
ID4040309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3741119 
End bp3741997 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content65% 
IMG OID637978880 
Productheat shock protein HtpX 
Protein accessionYP_585605 
Protein GI94312395 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTA TCTTTCTGTT CCTGGCGACC AACCTCGCCG TCATGCTTGT CCTCAGTGTC 
ACGGCCAGCC TGCTGGGCGT GAATCGCTTC CTGACCTCGA ACGGCCTCAA CCTCGGAATG
TTGCTGGCAT TCGCGGCGTT GATGGGCTTC GGTGGCTCGT TCATCTCGTT GCTGATGTCC
AAGACCATCG CCAAGTGGTC GACCGGCGCC CAGGTCATCA CCCACCCGAG CACCAGCACG
GAGCTCTGGC TCGTGCAGAC CGTCGAGAAG CTGGCCACGC GCGCCGGCCT GCCGATGCCA
GAGGTGGCGA TCTACGATGG CGAGCCCAAC GCATTCGCTA CCGGCGCGTC GAAGAGCAGC
TCGCTGGTGG CTGTGTCCAC GGGCCTGCTG CAGTCGATGT CGCACGACGA GGTCGAGGCC
GTGCTCGCGC ACGAAGTGGC CCACATCGCC AATGGCGACA TGGTCACGCT GACGTTGATT
CAAGGCGTGG TGAACACGTT CGTGATCTTC ATGGCACGCG TGGTCGGCTA CTTCGTCGAT
TCGTGGCTGC GCCGCAATGA CGAGGAGTCG AGCGGCCCCG GTATCGGCTA CATGGTCACC
GTGGTGGTCT GCGAGATCGT CTTCGGCATC CTGGCCAGCG TCATCGTCGC CACGTTCTCG
CGTCATCGCG AATATCGTGC CGACGCCGGC GCGGCGAAGC TGCTCGGCAC GCCGAGCCCG
ATGGTGGCGG CATTGCGCCG CCTGGGTGGT CTGGACGCCG ACGGCCTGCC GCAGAACATG
CAGGCGATGG GTATCTCGGG CGGCAAGTCG TGGCTGGCGC TGTTTGCAAG CCACCCGCCG
ATCGAATCGC GCATCGCGGC CCTGCAAGGC ACCCGCTAA
 
Protein sequence
MKRIFLFLAT NLAVMLVLSV TASLLGVNRF LTSNGLNLGM LLAFAALMGF GGSFISLLMS 
KTIAKWSTGA QVITHPSTST ELWLVQTVEK LATRAGLPMP EVAIYDGEPN AFATGASKSS
SLVAVSTGLL QSMSHDEVEA VLAHEVAHIA NGDMVTLTLI QGVVNTFVIF MARVVGYFVD
SWLRRNDEES SGPGIGYMVT VVVCEIVFGI LASVIVATFS RHREYRADAG AAKLLGTPSP
MVAALRRLGG LDADGLPQNM QAMGISGGKS WLALFASHPP IESRIAALQG TR