| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3286 |
|---|
| Symbol | |
|---|
| ID | 4040121 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 3562183 |
|---|
| End bp | 3563175 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637978692 |
|---|
| Product | delta-aminolevulinic acid dehydratase |
|---|
| Protein accession | YP_585427 |
|---|
| Protein GI | 94312217 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0113] Delta-aminolevulinic acid dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACGT TCCCCGAGTT CCGTCCCCGC CGCATGCGTC GCGACGACTT CTCGCGCCGC
ATGATGCGCG AGAATCGCCT GTCGCCTGAC AACCTGATCT ATCCGGTCTT TATCCTGGAA
GGCCAGAACC AGCGACAGAC CGTGGCGTCG ATGCCCGGCG TGGAACGTGT GTCCGTAGAC
CTGCTGATGC CGGTCGCGGA AGACTGCGTG AAGCTCGGCA TTCCGGTCAT CGCGCTGTTC
CCGGTGATCG ATCCGTCGCT GAAAACACCT GACGGCATCG AGGCCACCAA CCCGGAAGGC
CTGGTGCCTC GCGCCGTGCG AGCGCTGAAG GATCGCTTTC CCGAACTTGG CGTGCTGACC
GACGTCGCGC TCGATCCGTA CACGAGCCAT GGCCAGGATG GCGTGCTCGA CGAGAACGGT
TACGTGATCA ACGACATCAC CGTCGAGATC CTCGTCAAGC AGGCACTTGT CCAGGCGGAA
GCAGGTGTCG ACATCGTCGC GCCGTCAGAC ATGATGGACG GCCGTATCGG CGCCGTGCGC
AACGCGCTGG AAGAAGCGGG CCACATCCAC ACGCGCATCA TGGCCTACTC GGCCAAGTAT
GCGTCCGCGT TCTACGGCCC GTTCCGCGAT GCGGTGGGCT CGGCCAGCAA TCTGGGCAAG
GGCAACAAGA TGACCTACCA GATGGACCCG GCCAATACAG ACGAGGCCCT GCGCGAAGTC
GCACAGGACA TCATGGAAGG CGCCGACATG GTCATGGTGA AGCCGGGTAT GCCGTACCTC
GACATCGTGC GCCGCGTGAA GGACGAATTT CGCTTTCCGA CGTACGTGTA TCAGGTCAGC
GGCGAGTACG CGATGCTCAA GGCCGCCGCG CAGAATGGCT GGCTCGACCA CGACAAGGTC
ATGATGGAAT CGCTGCTGGC ATTCCGCCGT GCCGGCGCGG ATGGCATCCT GACCTACTTC
GCGCGCGACG CCGCGCGCCT GCTGCAGGCC TGA
|
|---|
| Protein sequence | MSTFPEFRPR RMRRDDFSRR MMRENRLSPD NLIYPVFILE GQNQRQTVAS MPGVERVSVD
LLMPVAEDCV KLGIPVIALF PVIDPSLKTP DGIEATNPEG LVPRAVRALK DRFPELGVLT
DVALDPYTSH GQDGVLDENG YVINDITVEI LVKQALVQAE AGVDIVAPSD MMDGRIGAVR
NALEEAGHIH TRIMAYSAKY ASAFYGPFRD AVGSASNLGK GNKMTYQMDP ANTDEALREV
AQDIMEGADM VMVKPGMPYL DIVRRVKDEF RFPTYVYQVS GEYAMLKAAA QNGWLDHDKV
MMESLLAFRR AGADGILTYF ARDAARLLQA
|
|---|
| |