Gene Rmet_3196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3196 
Symbol 
ID4040030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3470969 
End bp3472096 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content66% 
IMG OID637978601 
Producthypothetical protein 
Protein accessionYP_585337 
Protein GI94312127 
COG category 
COG ID 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.360276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACCG AACCATTCGA ACGCCTGCTC TGGCAGCAAC TTGCTGCTCG CGGTGCCGTG 
CAAGGCGAGT TCACGCCCGC GCTTCGCATG CCGTGGCCGA TTCGCCTGCT GATGGGCGCG
GCGGGCTGGC TCGGCGCGCT GTTCGCCCAA TTGTTCCTGC TGGGCTCCGT GTTCGCCGTG
ACGCGGGGCA ACGGCCCCGC TATCGCCATT ACCGGGTTGC TGATGATTGG CGCGGCGATC
CTGATGTATC GCACCACCAG TCAGGACAGC GCGCGCATCG CGCTGGGCCA GTTCGCGCTG
GCCGCGAGTC TGGGCGGACA GGGCATGGTG ATCGTTGGCG TGGGCGAGAG CCTTGGCATC
GATCGGCTTT CGCAGACCGC TGTGTTCTGG CTGGGTGTGA CCGCGCTGGA AGCCGTGCTG
TTCGTGATCG TGCCGAACCG GCTGCATCGG TTCGTGGCGG TGACTGGCGG CTGGTCGGCA
GCGACCATCG CGCTGTATAT CGCGCTGGGC GGCTCCATGC GGAATCCGTT CCTGATGATG
CCGCTCACGG TGGGCCTCCT GGGCGTGCTG GCGATGGCTG CCGTGATGGT CTTCGTGTTG
AACGAGGCAC GCATTGCGGC ACGCGGGACA CATGCGCTCT GGGAGCCCGC CGCCGACGCC
ACGTTGGTGT TCGGCCTGTC TTCGGCGCTA ATCATCACTG GAACCGCGCT TCCGTCCGAG
TTCCTGTTCG ATGGCATCAG GCATTTGCAG ACTCCCGGCA ACTGGGTGCC CGGCGTGTTG
GTCGGCGTCT GCCTGGTTGG CTTCGCGCAG ATCGAGGGCG CGCGCATTCG CTGTGATGCC
GGTATTCGTA TCGGCCTGAT GGTGCTGGCT GTGGCGTTCA GCGGCCTGAT GGTGATGGCG
CCGGCGGTCA CGGCCGGCGT GCTTGCGCTG GCCATGGCAT TGCGGCGCGC GTCGTTGCCG
TGGATCGGGC TGGCCATCGC GGCGATTCTG CTCGGGTTTA TCTGGTACTA CAGCACGCTG
CAGTGGACGC TGCTCGTCAA GTCGGTCACG CTCGCCGCCG CTGGCGTGTT GCTGCTGGCC
GCGCGGCTTG CGCTGACCCG TATGCCACGC AAGGAGGCCA TCGCATGA
 
Protein sequence
MSTEPFERLL WQQLAARGAV QGEFTPALRM PWPIRLLMGA AGWLGALFAQ LFLLGSVFAV 
TRGNGPAIAI TGLLMIGAAI LMYRTTSQDS ARIALGQFAL AASLGGQGMV IVGVGESLGI
DRLSQTAVFW LGVTALEAVL FVIVPNRLHR FVAVTGGWSA ATIALYIALG GSMRNPFLMM
PLTVGLLGVL AMAAVMVFVL NEARIAARGT HALWEPAADA TLVFGLSSAL IITGTALPSE
FLFDGIRHLQ TPGNWVPGVL VGVCLVGFAQ IEGARIRCDA GIRIGLMVLA VAFSGLMVMA
PAVTAGVLAL AMALRRASLP WIGLAIAAIL LGFIWYYSTL QWTLLVKSVT LAAAGVLLLA
ARLALTRMPR KEAIA