| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2972 |
|---|
| Symbol | |
|---|
| ID | 4039800 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 3230209 |
|---|
| End bp | 3230724 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637978372 |
|---|
| Product | rare lipoprotein B |
|---|
| Protein accession | YP_585114 |
|---|
| Protein GI | 94311904 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2980] Rare lipoprotein B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGAC CGAACATGGG ACGCCGCGGT TTCTTCGCCA TCGGCGCCGC GGCAGCGGCG
GCGGCATTGC TGGGTGGCTG CGGCTTCCAT ATGCGCGGTA ACGCCGATTT TGCGTTCAAG
CGGCTCTACA TCGGCATTCC CGCGAATTCG CTGATGGGTG CGGATTTGCG CCGCAACATC
CGCAATGGCT CGGACACGCA GATCGTTACC GACCCGAAGG AAGCGGACGC ACTGCTCGAC
GTGCTGGCCG ATACGCGGGC CAAGTCGATC CTCTCGATTA CCACCGAGGG TGTGGTGCGG
GAATACCGTC TGACCTACCG CTTTACCTTC CGCCTGCGCG ATGCCAGTGG CAAGGAGCTG
ATCCCACCGT CGACGCTGCT GCTGACGCGC GACCTGACGT ACAACGAAGC CAACACGCTG
GCCAAGGATT ACGAAGAGCA GCAGCTCTAT CGCGACATGC AGCGCGATGT TGTGAATCAG
CTCATGCGCC GGCTGGCCTC GGTCAAGACG ATCTGA
|
|---|
| Protein sequence | MDRPNMGRRG FFAIGAAAAA AALLGGCGFH MRGNADFAFK RLYIGIPANS LMGADLRRNI
RNGSDTQIVT DPKEADALLD VLADTRAKSI LSITTEGVVR EYRLTYRFTF RLRDASGKEL
IPPSTLLLTR DLTYNEANTL AKDYEEQQLY RDMQRDVVNQ LMRRLASVKT I
|
|---|
| |