Gene Rmet_2937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2937 
Symbol 
ID4039765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3192137 
End bp3192826 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content67% 
IMG OID637978337 
Producthypothetical protein 
Protein accessionYP_585079 
Protein GI94311869 
COG category[R] General function prediction only 
COG ID[COG0325] Predicted enzyme with a TIM-barrel fold 
TIGRFAM ID[TIGR00044] pyridoxal phosphate enzyme, YggS family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTAA TCGCCGCCAA CTTGCAAGCC GTGAAGAATG ACATCGCGGC GGCTGCACAA 
CAAGCCAGCC GGGACCCTTC CGGGGTGACC CTGCTGGCCG TCTCCAAGAC CGTCTCACCC
GATCGCGTGC GCGAGGCCTT CGAGGCCGGA CAGCCAGCGT TTGGCGAGAA CTACGTGCAG
GAAGGTCTGG ACAAGATCGC CGCGCTGGGC GATCTGCGCA GCCGCATCGC GTGGCACTTC
ATCGGCCCGC TGCAAAGCAA CAAGACCCGC CCCGTGGCCG AGCAGTTCGA CTGGGTCCAT
GCCATCGACC GCCTGAAGAT CGCGGAGCGG CTGTCAGCGC AGCGGCCGGC GGATCTGGCG
CCCCTGCAGG TCTGCATTCA GGTCAATATC AGCAACGAAG ACACCAAGAG TGGCGTGCTT
CCCGAGGAAG TGCTGGCGCT GGCGCGCGCC GTGGCCGCAT TGCCGAACCT GCGATTGCGC
GGCCTGATGG CGATTCCCGC GCCGGCAGCG GACCTGGCCG CTCAGCGCGT GCCATTTGCC
GCGCTGCGCC GGTTGCTCGA GGAACTGCGA CAGTCCGGAC TGGATGTGGA TACGCTCTCG
ATGGGGATGT CCGCCGACAT GCCCGCTGCC ATCGCCGAGG GCGCCACGAT GGTGCGGATC
GGCACCGCGA TATTCGGCGC GCGAGGCTGA
 
Protein sequence
MSVIAANLQA VKNDIAAAAQ QASRDPSGVT LLAVSKTVSP DRVREAFEAG QPAFGENYVQ 
EGLDKIAALG DLRSRIAWHF IGPLQSNKTR PVAEQFDWVH AIDRLKIAER LSAQRPADLA
PLQVCIQVNI SNEDTKSGVL PEEVLALARA VAALPNLRLR GLMAIPAPAA DLAAQRVPFA
ALRRLLEELR QSGLDVDTLS MGMSADMPAA IAEGATMVRI GTAIFGARG