| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2888 |
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| Symbol | |
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| ID | 4039716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 3143363 |
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| End bp | 3144382 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637978288 |
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| Product | luciferase-like protein |
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| Protein accession | YP_585030 |
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| Protein GI | 94311820 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR03558] luciferase family oxidoreductase, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.105066 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAAC CCCGCCCCAA GCTGCGCCTG TCCGTGCTCG ACCAGAGCCC GGTCATCGCC
GGCCATACCG CGCGCGACGC GGTGGCTGCG ACCGTCGAAC TGGCCCAGAT GGCCGACGAT
CTCGGCTATA CCCGCTACTG GTGCGCCGAG CACCACGGTC TGCAAGGCGT CTGCAATCCC
GCGCCCGAAG TCATGCTTGC GCGGCTGGGC AGCGCGACGA AGCGCATCCG CGTGGGCTCC
GGCGGCGTGA TGCTGCCCTA CTACAGCCCG TTCAAGGTGG CCGAGCAGTT CCGTATGCTC
GAAGCGCTGT TTCCGAACCG CGTCGACCTG GGCGTGGGCC GCGCGCCCGG CGGCGATATG
CGCACTGCGC AGGCGGTGGC CATGGGGCAG TACAACCGTG GCGACCAGTT CCCGCAACAG
GTGCAGGACC TGGCCTGGCT GCTGCGCGGG GAAGTCCCGC CCGACCATCT GGCCGAAGGG
GTGCTGCTGC AGCCGGTGAT CGACACCAAA CCCGAACTCT GGGTGCTTGG TTCGAGCGAT
TTCGGCGGCG CGCTGGCCGC CCGTCTCGGG CTGCGATTCG CGTTTGCCCA CTTCATCAAT
GCGCACAGCG GGCATCTGGT TACCCAGCAA TATCGCGAAG CGTTCGAGCC TGGCTACGAG
GACAAGCCTT ACAGCGCCGC GGCTATCTTC GTGATCTGCG CCGATACCGA ACAGGAAGCC
GCGACGCTGG AACGCGCGGT CGATATCCGC CGGCTGCAGA TGGCCTACGG CGTGAACGCG
CCCATTCCCT CGCTGGCGCA GGCCGCCGAC TTCACGCCGA CCGAACGCGA CCGGATGATC
ATCGAGCGCG AACGGCCGCG CACGATCTGT GGCACGCCCG AGCAGGTTGC CGAGCGGATG
CTGGCGCTCA AGGACCGGTT CGCGGCGGAC GAACTAGTTG TGCTGAGCGT GACGGCCTCC
TACAAGGCGC GTCTGCGCAC CTATCAGTTG CTGGCCGAGG CATTCGACCT GGCCGCCTGA
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| Protein sequence | MSQPRPKLRL SVLDQSPVIA GHTARDAVAA TVELAQMADD LGYTRYWCAE HHGLQGVCNP
APEVMLARLG SATKRIRVGS GGVMLPYYSP FKVAEQFRML EALFPNRVDL GVGRAPGGDM
RTAQAVAMGQ YNRGDQFPQQ VQDLAWLLRG EVPPDHLAEG VLLQPVIDTK PELWVLGSSD
FGGALAARLG LRFAFAHFIN AHSGHLVTQQ YREAFEPGYE DKPYSAAAIF VICADTEQEA
ATLERAVDIR RLQMAYGVNA PIPSLAQAAD FTPTERDRMI IERERPRTIC GTPEQVAERM
LALKDRFAAD ELVVLSVTAS YKARLRTYQL LAEAFDLAA
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