| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2856 |
|---|
| Symbol | |
|---|
| ID | 4039684 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 3105744 |
|---|
| End bp | 3106511 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637978256 |
|---|
| Product | histidine utilization repressor |
|---|
| Protein accession | YP_584998 |
|---|
| Protein GI | 94311788 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR02018] histidine utilization repressor, proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAGT CCGCCAGCCA GGCACCCACC CCGACCAACG CCACCGCGCC TGCCGCGCTA
TATCGGCAGG TCAAGGAATA CATCGCGCGC CAGATCCAGA GCGGCGTGTG GAAACCCGGT
GACCGCGTGC CGTCCGAGCA GGAGCTCGTG AACCGCTTCT CGGTATCGCG GATGACGGTC
AATCGCGCGC TGCGCGAATT GTCGGAGCAG GGCAGGGTGG TGCGCGTGGC TGGTGTGGGG
ACGTTCGTGG CCGAGCAGAA GCCGCAGTCG ACGCTGCTTT CCGTGGTCAA CCTGCAGGAC
GAGATCCGTA TGCGTGGGCA TGACTACGCG TGCGACGTGA TCCTGGTGGA GCGCGTCTCC
GCGCCGATCG AGGTCGCCGC CGCACTGGAG TTGCACACGG GCGAGTCGGT GTACCACTCG
GTTTGTGTGC ATCGCGAGGA CGGCGTGCCA GTTCAGCTCG AAGACCGCTA CGTGAACCCG
CGCGTGGCGC CAGATTTCAT CAACCAGGAT TTCAGCGGCA CCAAGCCCGG CGAATACCTG
TTGCGCAATG TGCCGTACGA CCAGGTGGAG CATGTGGTCG ATGCGATCTC CGCCACGCCC
GAGCAGGCGG CGCAGCTTGA GATGCCCCCG ACGCAGCCGT GCCTGCTGCT GACGCGCCGC
ACATGGACCA ACGGCGTGCC GGTGACGTTC GTGCGTTGCC TGCACCCGGG CAACCGCTAC
CGGCTTGGCA GCCGCTTCCG TGCCGACGGC AATCCTGCCT TCGGCTGA
|
|---|
| Protein sequence | MNQSASQAPT PTNATAPAAL YRQVKEYIAR QIQSGVWKPG DRVPSEQELV NRFSVSRMTV
NRALRELSEQ GRVVRVAGVG TFVAEQKPQS TLLSVVNLQD EIRMRGHDYA CDVILVERVS
APIEVAAALE LHTGESVYHS VCVHREDGVP VQLEDRYVNP RVAPDFINQD FSGTKPGEYL
LRNVPYDQVE HVVDAISATP EQAAQLEMPP TQPCLLLTRR TWTNGVPVTF VRCLHPGNRY
RLGSRFRADG NPAFG
|
|---|
| |