| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2744 |
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| Symbol | |
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| ID | 4039570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2978840 |
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| End bp | 2979556 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637978143 |
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| Product | ribosomal small subunit pseudouridine synthase A |
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| Protein accession | YP_584886 |
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| Protein GI | 94311676 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACGA CACTCGACCG CATCCTGCAA TCCCAAGGCT TCGGCACCCG CCGCTATTGC
GGCGATCTGG TGGCGGCCGG GCTGGTCGAG GTCAACGGTG AACTCTGCGA GGACCCGGGT
GCGCGTTTCG AGGTGGACGG GCTGCGCCTG ATGGTCGACG GCGAGGAGTG GCTGGCGTGC
ACCAAGGCCT ACGTGATGCT GAACAAGCCG ACGGGCTACG AATGCTCCCA GCGTCCGCGC
CATCATCCAA GTGTGTACAA CCTGCTGCCG GTACCGCTGC GCCAGCGGGA GGTCCAGGCT
GTGGGGCGGC TCGATCACGA CACCACCGGA TTGCTGCTGC TGACCGACGA CGGTCAGTTC
ATCCACGCCC AGACCTCGCC GAAGAAGCAG GTGCCGAAGA TTTACGAAGT GACGACCTTC
GACCCGGTTA CGCCGGAACA GGTGGAAGCG TTGCGCACTG GCGTGAAGCT CGACGACGAA
CCGGCGCCGA TTGCCGCCGA TGCGTGCGAA GCGACCGGCG AGCGCAGCCT GCGTCTGACA
CTGCTGCAGG GCAAGTACCA TCAGGTCAAG CGGATGGTCG CTGCGGTGGG TAACCACGTG
ACCGCGTTGC ATCGCAGCGC GATCGGCGGA CTCGTGCTCG ACCCCGCGCT GGGCCCCGGA
GAATGGCGCT GGCTCACGCC GGAAGACCTG GCCGCGCTGC GCGACGGAGC GCGTTGA
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| Protein sequence | MATTLDRILQ SQGFGTRRYC GDLVAAGLVE VNGELCEDPG ARFEVDGLRL MVDGEEWLAC
TKAYVMLNKP TGYECSQRPR HHPSVYNLLP VPLRQREVQA VGRLDHDTTG LLLLTDDGQF
IHAQTSPKKQ VPKIYEVTTF DPVTPEQVEA LRTGVKLDDE PAPIAADACE ATGERSLRLT
LLQGKYHQVK RMVAAVGNHV TALHRSAIGG LVLDPALGPG EWRWLTPEDL AALRDGAR
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