| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2697 |
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| Symbol | |
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| ID | 4039522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2928066 |
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| End bp | 2929133 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637978095 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_584839 |
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| Protein GI | 94311629 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.895889 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGTT GGAAAACCCT TCATCTTCCC GGTATCGGGC GGGCATTGCA GGTCCGCTTT
AGACAACCGG TTCCCGGTGT GAGCCGCGCA CTGCAAGTGC GACTGGCCCA TCCGGTGGCA
GGCCGCGCGT TGCTGCGCGG TGGCCGCACA ACTTTGAAGT ACACCCTGAA CAGTCTCGGG
GTGCTGTCGG TGGCCGCAGC GGTCACCTTG ACCGTCAGCC AGCAATGGCG GACCTCGCTC
GCCGGTGCGC TGGCAGGCAA CGAAGCCCCT GCCGTGCTGG TGGATGCCGC CGTGTCGAAG
GATTCGATCA GCCATGTGCC GCCCATGTCG GCGGATGTGG CCGCGTCGCG CCTGGTGGCC
GCCGTGGCCA GCCATGGCAG TTCGGGCCTG CCGACCGTGT CGGGCGTGGA CGAATGGAGC
CAGACGGCTG CCGGCAAGGT GCCGTCCGTG GCGCATCTGG CCGCGCAGAT TCCGGTCCAG
CGCGTGGCGC TGGACGCCCG CAACACGGCT GCGCTCGGCT CCGCGCGTGA GCAGGCTGCC
GTGGCCGAGT ACATCGCCCG CAAGTACCGC GTGGCGACGC AGGCGACTGC GCAGCTCGTG
AAGGCCGCCT ATATGACGGG TCGCGAGGTC GGTATCGATC CGCTGCTGAT CCTGGGCGTG
ATCGCGATCG AGTCGAGCTT CAATCCGTAC GCGGAAAGTG GCGTTGGCGC GCAGGGCCTG
ATGCAGGTCA TGACGAAGGT TCACCAGGAC AAGTACGAGG CCGTGGGCGG CGTGTCCGCC
GCGCTGAATC CGTACGCCAA CATCAAGATT GGCGCGCTGG TGCTCAAGGA TTGCATCGCG
CGTGCCGGTT CGATCGAAGG CGGGCTGAAG TACTACGTGG GTGCCACGAC CAATACCGAC
GGCGGCTATG GCGCCAAGGT GCTGGCCGAG CGCGCGCGTC TGCGTGCCCT GCTGGGTCTG
CCGAACACGG AGAAGGCACC GGGCGTTTCC GATACCAAGA CGCAGGCCGA GCATCATCAA
GGCACCGAGA AGCTCGAGGC GTCCGGCAAT ACGGCCCAGT CGGCTTGA
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| Protein sequence | MSGWKTLHLP GIGRALQVRF RQPVPGVSRA LQVRLAHPVA GRALLRGGRT TLKYTLNSLG
VLSVAAAVTL TVSQQWRTSL AGALAGNEAP AVLVDAAVSK DSISHVPPMS ADVAASRLVA
AVASHGSSGL PTVSGVDEWS QTAAGKVPSV AHLAAQIPVQ RVALDARNTA ALGSAREQAA
VAEYIARKYR VATQATAQLV KAAYMTGREV GIDPLLILGV IAIESSFNPY AESGVGAQGL
MQVMTKVHQD KYEAVGGVSA ALNPYANIKI GALVLKDCIA RAGSIEGGLK YYVGATTNTD
GGYGAKVLAE RARLRALLGL PNTEKAPGVS DTKTQAEHHQ GTEKLEASGN TAQSA
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