| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2498 |
|---|
| Symbol | |
|---|
| ID | 4039321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 2712514 |
|---|
| End bp | 2713275 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637977897 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_584644 |
|---|
| Protein GI | 94311434 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4700] Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0034451 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAATC TCGGTATCGG CGGCATCGGC CTGCACGTGA TCGTGGCGAT TTTCTTCGCC
GTGCACGCCG TTCGCACCCA CCAGAACATG TACTGGTTGC TGCTGCTATT CCTGTTCCCG
GGCCTAGGCA GCATCGTCTA TTTCTTCGCA GTTTATTTGC CTAGCCTGCG CGACTCGCGC
GGGGCGCGGG CAGCGTCGCG GGCGATCAAG CAGATCGTCG ATCCGAACCG GGCCGTACGC
GAAGCGCGCG AGGCATTCGA CCGGGCGCCG ACTGTCGATC ACCGCATGCG CCTGGGTGCT
GCCTTGCTGG AAGTGGGCAA CGCGGCCGAG GCGCTCGAGC ACTATCAGGC CGCGGCCAAC
GGCCCGTTTG CGTCCGATCC GGCATTGCTT GAGGGGCTGG CGCGCGCCCA GGTCGCCACG
GGCCGCCATG CCGATGCGCA GGCGACGCTT GAGAAGCTGT TTGCCGCGCA TCCGCAGGCG
CGGGACCAGG CCGAACCCGC ATTGCTTTAC GCGCGTGCGC TGTCCGCGCT CGATGCGCCC
GGCACGCGCG ACGCCTTCGA GCGCTCGCTG ACCTGCGCCA GCGATGCCGC GCCGCGCTGT
CTGTATGCCG ACTGGCTTTC CCGCCAGGGT GATGCAGCCG ACCGTGAGCG CGCCAAGTCG
CTGTACTCGG AAATTGTTCA CGACGCGCGC CACTGGCCGC GTCACGCCCG CGAGCACAAT
CGCGAATGGC TCCAGCGCGC GCAGGTCGCG CTGGGCCAAT GA
|
|---|
| Protein sequence | MSNLGIGGIG LHVIVAIFFA VHAVRTHQNM YWLLLLFLFP GLGSIVYFFA VYLPSLRDSR
GARAASRAIK QIVDPNRAVR EAREAFDRAP TVDHRMRLGA ALLEVGNAAE ALEHYQAAAN
GPFASDPALL EGLARAQVAT GRHADAQATL EKLFAAHPQA RDQAEPALLY ARALSALDAP
GTRDAFERSL TCASDAAPRC LYADWLSRQG DAADRERAKS LYSEIVHDAR HWPRHAREHN
REWLQRAQVA LGQ
|
|---|
| |