Gene Rmet_2461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2461 
Symbol 
ID4039284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2672460 
End bp2672957 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content65% 
IMG OID637977860 
Productcolicin V production protein 
Protein accessionYP_584607 
Protein GI94311397 
COG category[R] General function prediction only 
COG ID[COG1286] Uncharacterized membrane protein, required for colicin V production 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.400499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.228634 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTTA CTTTTTTCGA TTACGCGGTG GCCTTCATCG TGGTGGCCTC GGGCCTGGTT 
GGCATACTGC GTGGCCTGGT GCGCGAAGTG CTCGCGCTGG TGGGCTGGGT CGTGGCTTTC
GTGCTGGCAT ACCATTTCGG CGGCATGGCC GCACAATGGA TGCCGGAGTC GCTGCCTGGC
GGCGAACTGA CGCGCAGCGC GCTGGGCTTT CTCGCCGTAT TCTTTGGTAC GTGGATCGTC
GCCGCGTTGG CGGGGGCGAT TCTGGGCCAG TTACTGGAAT CCACCGGGCT GAAGCCGGCG
GATCGCGGCC TGGGGCTGTT GTTCGGGCTG GCGCGTGGCG CGCTGATCGT GATGCTGGTC
GTCGTGCTGG CGGGCCTCAC CAGGCTGCCA GAAGAGCCAT TCTGGCGTGA CGCGGTGTCG
CGCCCCTATG TGATGCAGGC CATGGACGAG CTGCGGCACT GGCTGCCGCC GGACCTGGCC
AAATATGTGA AGACGTGA
 
Protein sequence
MAFTFFDYAV AFIVVASGLV GILRGLVREV LALVGWVVAF VLAYHFGGMA AQWMPESLPG 
GELTRSALGF LAVFFGTWIV AALAGAILGQ LLESTGLKPA DRGLGLLFGL ARGALIVMLV
VVLAGLTRLP EEPFWRDAVS RPYVMQAMDE LRHWLPPDLA KYVKT