Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2461 |
Symbol | |
ID | 4039284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 2672460 |
End bp | 2672957 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637977860 |
Product | colicin V production protein |
Protein accession | YP_584607 |
Protein GI | 94311397 |
COG category | [R] General function prediction only |
COG ID | [COG1286] Uncharacterized membrane protein, required for colicin V production |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.400499 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.228634 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTTTA CTTTTTTCGA TTACGCGGTG GCCTTCATCG TGGTGGCCTC GGGCCTGGTT GGCATACTGC GTGGCCTGGT GCGCGAAGTG CTCGCGCTGG TGGGCTGGGT CGTGGCTTTC GTGCTGGCAT ACCATTTCGG CGGCATGGCC GCACAATGGA TGCCGGAGTC GCTGCCTGGC GGCGAACTGA CGCGCAGCGC GCTGGGCTTT CTCGCCGTAT TCTTTGGTAC GTGGATCGTC GCCGCGTTGG CGGGGGCGAT TCTGGGCCAG TTACTGGAAT CCACCGGGCT GAAGCCGGCG GATCGCGGCC TGGGGCTGTT GTTCGGGCTG GCGCGTGGCG CGCTGATCGT GATGCTGGTC GTCGTGCTGG CGGGCCTCAC CAGGCTGCCA GAAGAGCCAT TCTGGCGTGA CGCGGTGTCG CGCCCCTATG TGATGCAGGC CATGGACGAG CTGCGGCACT GGCTGCCGCC GGACCTGGCC AAATATGTGA AGACGTGA
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Protein sequence | MAFTFFDYAV AFIVVASGLV GILRGLVREV LALVGWVVAF VLAYHFGGMA AQWMPESLPG GELTRSALGF LAVFFGTWIV AALAGAILGQ LLESTGLKPA DRGLGLLFGL ARGALIVMLV VVLAGLTRLP EEPFWRDAVS RPYVMQAMDE LRHWLPPDLA KYVKT
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