Gene Rmet_2292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2292 
Symbol 
ID4039113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2512230 
End bp2513909 
Gene Length1680 bp 
Protein Length559 aa 
Translation table11 
GC content70% 
IMG OID637977690 
Producthypothetical protein 
Protein accessionYP_584440 
Protein GI94311230 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0363731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000163049 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTGACA TGACCTCGCA GGACATGGCA GGCAAGCTGC TCGCGGCCGG CTTCGAGCGC 
AGCGGCCCAG CGGCTACGGC CTTGAGCGAC CCGATCGCGG ACACGCCCAT GGTCGTGACG
CTGGACCAGT TGCGGCCCTA CGACCATGAC CCGCGCATGA AGCGCAACCC GGCTTACGAG
GAAATCAAGG CATCCATCCG CGAGCGCGGC CTGGACGCGG CGCCGGCCAT CACGCGCAGG
CCCGGCGAGG ACCACTACAT CATCCGCAAC GGCGGCAACA CGCGACTGGC GATCCTGCGC
GAACTCTGGT CGGAGACCAA GGAAGAACGC TTCTTCCGCA TATCGTGCCT GTTCCGACCA
TGGCCGGAGC GCGGTGAAAT CGTCGCGCTG ACCGGGCATC TTGCCGAGAA CGAACTGCGC
GGCGGCCTCA CGTTCATCGA GCGCGCGCTC GGCGTCGAGA AAGCACGGGA GTTCTACGAG
CAGGAGAGCG GCGCCGCCCT GAGCCAGTCG GAACTGGCCC GCCGCCTGGC GGCCGATGGC
TTCCCCGTCC AGCGGTCGCA CATCACCCGC ATGGCCGACG CGGTGCGCTA CCTGCTGCCC
GCCATTCCCA CTGTGCTCTA TGGCGGCCTG GGGCGCCACC AGGTCGAGCG GCTGTCGGTC
ATGCGCACGG CCTGCAAACG CACCTGGGAG CACTACGCCA AGGACCGTTC GCTGCCGCTG
GACTTCGACA GTTTCTTTCA GGAGGTGCTG GCGCAGTTCG ACACGCAGGG CGACGAGTTC
GCGCCGCAGC GCGTGCAAGA CGAGCTGATC GGCCAGATGT CCGAGCTGCT GGGCATCGGC
TACGACGTGC TGGCGCTGGA CCTGACCGAA TCGGAAAGCC GCCACCGGGC GCTGGTCAGT
GACCCGACGC CACCTGCGGC GCAGCCGGCG TTGCCTTCGC CCACCGCCGG CACGCCGACT
CCGCCGGGCG CAGCATCGTC CATCGCCACG CCTGCAGCGG CGGCCGGTCC TCCACCCGCC
AGCCCTCCGG CGTCCGAGCC CACCTTGCGC CACGACGACA CGGCGGTTGG CGAAGCGGCC
ACGGGAAGCC AGCCGGCCGC ACCGGGCGAT CTGCTTCGCG AGCACATCGT CTCGCCAGCA
CCGACGACAG AACGGCTCCA ATCGATCCAG CGCATGGTCG CCGACCAGTT GGGCGATGCG
CTGCCGCCCG ACTTCTCGGC GAGCGTGCTG CAGTCCATCC CGGTGCAAGC CGGCGGACTC
TATCCGATCT CCGACGTCTG GTACATCGAC GCCGGCCTGG ACACGCCCGA TCGGCTGCGC
ATCCACATCG CGCAGTTCGC GCGCGAGATC GCCGGGGAGG CAGGCCTGGA CGAGTGCATC
GAGGATCGCG CCGATGGCAT CGGGTTTGCG TGCCGCGCCC GCGGCCAAGC CCCGTCGCCG
CTCGGCCGCG CGGTGCTGAC GCTGCTCACT TCCCTGACGG GTCAGCCCGT CGCCGAAGCG
GGCCTGGACG GCGCGCAGCT CGCCGCCGAC CTGCCGACCC TGTTGCACGG CCAGAGCCAA
GGCCATGGCA GCGGCGCAAG GCGCTTGAGC GACACGGCGT TGGTCAAGCT CTTTCGGCTG
CTGCGCCTCG CCCGGCGTCT GCTGGACCTG GAAGCCGGCA CCACGGCGCC CGGGACGTGA
 
Protein sequence
MADMTSQDMA GKLLAAGFER SGPAATALSD PIADTPMVVT LDQLRPYDHD PRMKRNPAYE 
EIKASIRERG LDAAPAITRR PGEDHYIIRN GGNTRLAILR ELWSETKEER FFRISCLFRP
WPERGEIVAL TGHLAENELR GGLTFIERAL GVEKAREFYE QESGAALSQS ELARRLAADG
FPVQRSHITR MADAVRYLLP AIPTVLYGGL GRHQVERLSV MRTACKRTWE HYAKDRSLPL
DFDSFFQEVL AQFDTQGDEF APQRVQDELI GQMSELLGIG YDVLALDLTE SESRHRALVS
DPTPPAAQPA LPSPTAGTPT PPGAASSIAT PAAAAGPPPA SPPASEPTLR HDDTAVGEAA
TGSQPAAPGD LLREHIVSPA PTTERLQSIQ RMVADQLGDA LPPDFSASVL QSIPVQAGGL
YPISDVWYID AGLDTPDRLR IHIAQFAREI AGEAGLDECI EDRADGIGFA CRARGQAPSP
LGRAVLTLLT SLTGQPVAEA GLDGAQLAAD LPTLLHGQSQ GHGSGARRLS DTALVKLFRL
LRLARRLLDL EAGTTAPGT