| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2269 |
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| Symbol | |
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| ID | 4039088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2489373 |
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| End bp | 2491424 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637977665 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_584417 |
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| Protein GI | 94311207 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0596593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.278439 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAGACA CCCAGTCGCG CTTTCGCCGC CGGTTGATGC TGTACTACGG CCTGTTCACG
CTCGGGCTGT TTGGTTTCGT CGGCATGATG GGCTTGCTGG AGCATTCCAA CGCGGATGCG
CTCTGGCTTG GCTACGTCTT CCTCTTCGTC ACGATCGCGA TCTATGCGTG CATCGGCCTG
ATCTGCCGTA CCTCGGATCT CAACGAGTAC TACGTGGCGG GACGGCGGGT GCCGGCCATG
TTCAATGGCA TGGCGATCGC CGCGGACTGG ATGAGCGCGG CATCCTTCAT CGGACTGGCC
GGCATCATCT TCGTCTCGGG CTACGAAGGG CTGGCCTATG TAATGGGTTG GACCGGCGGC
TACTGCCTGG TGGCCTTCCT GTTGGCGCCA TACCTGCGCA AGTACGGCGG CTACACGATC
CCCGATTTCC TGGCGGCGCG GTACGGCAAC GGCAAGCCGG GCGGCAACAT GCCGGTGCGC
GCGATCGCCG TGCTGGCTGC ATCGCTATGT TCGTTCGTTT ATCTGGTGGC GCAGATCCAG
GGAGTCGGGC TGATCGTCAC GCGCTTTATC GGCGTGGAAT TTGCCGTTGG CGTGTTCTTC
GGTCTGGCCG GCATTCTCGT CTGTTCGTTC CTGGGTGGAA TGCGCGCCGT GACGTGGACG
CAGGTGGCGC AGTACATCAT GCTCATCGTC GCGTTTCTGC TGACGGTGTC GCTGATCGCG
TGGAAGCACC ACCACGAAGT GCTGCCGCAG GTCAGCTATG GCAAGTTGTT GAGTCAGATC
GACCAGACGG AAAAAGCGAT CGAGCGCGAT CCGGCCGAAA TTCAGGTGCG CGAGATCTTT
CAGCAGCAGG CCATAGCGCT GCAGGACCGC ATCGCGCGAC TGCCGGAATC GTTCCTGGAG
GAACGCAACG CGCTCGACGC CAGATTGCTC GAGTTGCGGG CGCGCAATGC GCCGCTGCGC
GAGATCAAGA GCGTGGAGCG CGAACGCCTG GCATTCCCGG TCGATGCGGC GGACGCGCTG
CAACAGTGGA CCCAGATGCG CGAGGATGCG CTCGCACGCA GCCGGGTTTC GACGCCCTCG
ACTGAGCCAT ACCCTGCGGC TTCGGAGCAG GAGCGCAAGA CGCAACGGCT CAACTTCGTG
CTGCTGGTGT TCTGCCTGAT GCTCGGGACT GCCAGCCTGC CGCACATCCT GACGCGCCTC
TACACGACGC CATCGGTACG CGAATCGCGC AACTCGGTGG CCTGGGCGGT GTTCTGCATT
GCGCTGTTGT ACGTGTCCGC GCCAACGCTC GCGGCGCTGG TCAAGGCCGA GTTCCTGCAG
CATCTGGTAG GTACGCCATA CGCCGAGTTG CCGCAGTGGG TGGTGCAATG GCGGAAGGTC
GACCCACCCG TGTTCGGCAT CCGGGACATG AACGGCGATG GCATCGTCCA ATGGGCCGAG
ATCCTGATCC AGCCGGACAT GATCGTGCTG GCCGCCCCGG AAATCGCCGG GCTTCCCTAC
GTGATCTCAG GACTGGTCGC GGCCGGCGCG CTGGCGGCAG CGCTGTCCAC AGCCGACGGC
CTTCTGCTCA CCATCGCCAA CGCGCTGTCG CACGACGTCT ACTACCACAT GGTCGACCGC
CAGGCGAGCC ACCAGCGGCG CGTGACGACC GCGAAGGTCG TGCTGCTAGG GGTGGCGCTA
TTTGCGTCCT ATGTCACGTC GCTGCGGCCC GGCAACATCC TGTTCCTGGT CGGCGCGGCG
TTCTCGCTGG CGGCATCGAG CTTCTTCCCG GTATTGGTAC TAGCCATCTT CTGGCGCCGC
ACCACTGCAG CGGGCGCGGT AGCCGGCATG GCAACCGGCC TGGGTGTGGC GGTCTACTAC
ATCTTCGTCA ACTACCCGTT TTTCACCAAG ATGACTGGAA TCTTCGGCAA CCGCTGGTTC
GGCGTCGACC CGATTGCATC GGGCGCGTTC GGTGTGCCAG CCGGGTTTGC CGCGGCCATC
CTGGTCAGTC TGGTGACGCC GAGGAATGCG CCGGTGATCG ACAGGTTGGT GAATTATCTG
CGGAAGGGGT AG
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| Protein sequence | MPDTQSRFRR RLMLYYGLFT LGLFGFVGMM GLLEHSNADA LWLGYVFLFV TIAIYACIGL
ICRTSDLNEY YVAGRRVPAM FNGMAIAADW MSAASFIGLA GIIFVSGYEG LAYVMGWTGG
YCLVAFLLAP YLRKYGGYTI PDFLAARYGN GKPGGNMPVR AIAVLAASLC SFVYLVAQIQ
GVGLIVTRFI GVEFAVGVFF GLAGILVCSF LGGMRAVTWT QVAQYIMLIV AFLLTVSLIA
WKHHHEVLPQ VSYGKLLSQI DQTEKAIERD PAEIQVREIF QQQAIALQDR IARLPESFLE
ERNALDARLL ELRARNAPLR EIKSVERERL AFPVDAADAL QQWTQMREDA LARSRVSTPS
TEPYPAASEQ ERKTQRLNFV LLVFCLMLGT ASLPHILTRL YTTPSVRESR NSVAWAVFCI
ALLYVSAPTL AALVKAEFLQ HLVGTPYAEL PQWVVQWRKV DPPVFGIRDM NGDGIVQWAE
ILIQPDMIVL AAPEIAGLPY VISGLVAAGA LAAALSTADG LLLTIANALS HDVYYHMVDR
QASHQRRVTT AKVVLLGVAL FASYVTSLRP GNILFLVGAA FSLAASSFFP VLVLAIFWRR
TTAAGAVAGM ATGLGVAVYY IFVNYPFFTK MTGIFGNRWF GVDPIASGAF GVPAGFAAAI
LVSLVTPRNA PVIDRLVNYL RKG
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