8 homologs were found in PanDaTox collection
for query gene Rmet_2258 on replicon NC_007973
Organism: Cupriavidus metallidurans CH34



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007973  Rmet_2258  hypothetical protein  100 
 
 
75 aa  152  1e-36  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.23975 
 
 
-
 
NC_007348  Reut_B3519  hypothetical protein  55.56 
 
 
70 aa  52  0.000003  Ralstonia eutropha JMP134  Bacteria  normal  0.11152  n/a   
 
 
-
 
NC_009075  BURPS668_A2224  hypothetical protein  44.19 
 
 
64 aa  43.9  0.0008  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0624  hypothetical protein  44.19 
 
 
69 aa  43.5  0.0009  Burkholderia pseudomallei 1710b  Bacteria  normal  0.0231312  n/a   
 
 
-
 
NC_008835  BMA10229_2015  hypothetical protein  44.19 
 
 
64 aa  43.5  0.0009  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0693  hypothetical protein  44.19 
 
 
64 aa  43.5  0.0009  Burkholderia mallei NCTC 10247  Bacteria  normal  0.525895  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2138  hypothetical protein  44.19 
 
 
62 aa  43.5  0.001  Burkholderia pseudomallei 1106a  Bacteria  normal  0.565633  n/a   
 
 
-
 
NC_010084  Bmul_1919  hypothetical protein  43.18 
 
 
64 aa  42.7  0.002  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.765894 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>