| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2226 |
|---|
| Symbol | |
|---|
| ID | 4039044 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 2439802 |
|---|
| End bp | 2440662 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637977621 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_584374 |
|---|
| Protein GI | 94311164 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.359853 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0898053 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAAAAAA GCACAATCTC ATGGGATGAT CTGCTAACGC TGTCAACGCT GATGCGGGCC
GGCAGCTATT CCGCCTGCGC GCGCGAACTC GATATCACCC ATGCCACGGC CATCCGACGG
ATCCGGCGCC TGGAAACAGC GCTGGGCAAG CCCGTTGCCA CCCGGGCAGA CGGCACCTTC
GTGCTGACCG CGGCAGGGCG CAACGCACTG ATTGCGGCGC GCCAGATGGA GCAGTCCGCC
GACCGCCTGC TGCGGGAAAT CGAAGGCGTG GCATCGGGGG TCTCGGGGGT GGTGCGGGTG
GCAGCCACCG CAGCGATGGG CACGTGCCTG CTGACGCCGC GCCTGCCGGC GCTCTACGCG
GCCAATCCAG AGGCGGAAGT CAGGCTCGAA CTGGACAACC GGGTAGCCAG CCTGGCCAGG
CGCCGCGCGC ATATCGCGGT GCGTCTGGCA CGGCCGCAGG AAGACACAGT GGTCGCCCAA
CGCGCGGGGA CCGTGCATTT CGGACTCTAT GCGCCGGCCG GTATGACAGT GGCCACCGCG
CTCGCCAGCG ATACGCCACT CTGTGGCCTG CTCGACGAGG GTTTCACGCT GCCGGAAGTG
GAGTGGCCGA AATCGCTGAA TCGGCGTTTC GCTTTCCAGT CCAATAGCCT GCTGGCGGTC
AGCCAGGCAG TGCGCACCGG CCTGGGGGTC GCCCTGCTCC CCCACTACCT CGCCGCTGGA
GACCCGGGCC TGACCCTGGC GCAGGACGTA CCCGAGGTCA CCCGTGAAAT CTGGCTGGCT
TACCCGGCCG AGTTTCGTGG GGCGTCACGC TTCCGTCCGG TCATCGACTG GCTGGTCGAA
GCGCTGGCCG AGTGCCGCTG A
|
|---|
| Protein sequence | MQKSTISWDD LLTLSTLMRA GSYSACAREL DITHATAIRR IRRLETALGK PVATRADGTF
VLTAAGRNAL IAARQMEQSA DRLLREIEGV ASGVSGVVRV AATAAMGTCL LTPRLPALYA
ANPEAEVRLE LDNRVASLAR RRAHIAVRLA RPQEDTVVAQ RAGTVHFGLY APAGMTVATA
LASDTPLCGL LDEGFTLPEV EWPKSLNRRF AFQSNSLLAV SQAVRTGLGV ALLPHYLAAG
DPGLTLAQDV PEVTREIWLA YPAEFRGASR FRPVIDWLVE ALAECR
|
|---|
| |